RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IGF2P01344 180 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 FCER2P06734 321 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF44P15621 663 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SRMP19623 302 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 INPP5JQ15735 1006 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 C3AR1Q16581 482 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF718Q3SXZ3 478 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SLC25A24Q6NUK1 477 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SLC22A25Q6T423 547 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 LRRC28Q86X40 367 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 OR6M1Q8NGM8 313 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 KCNG3Q8TAE7 436 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 EXTL1Q92935 676 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 GMPPAQ96IJ6 420 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CCDC32Q9BV29 185 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 PALMDQ9NP74 551 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 MYEF2Q9P2K5 600 aaKnown RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 FBXO9Q9UK97 447 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CHCHD2Q9Y6H1 151 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 AHRRA9YTQ3 701 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DIRAS3O95661 229 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SEMG1P04279 462 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 UBBP0CG47 229 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ZP4Q12836 540 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 TPBGQ13641 420 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF181Q2M3W8 571 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 RNASE10Q5GAN6 216 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 OR2G2Q8NGZ5 317 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SYNPRQ8TBG9 265 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ITFG2Q969R8 447 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 APOBEC3DQ96AK3 386 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 CENPOQ9BU64 300 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 EGLN1Q9GZT9 426 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 PBOV1Q9GZY1 135 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DNTTIP1Q9H147 329 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 RGCCQ9H4X1 137 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ATP23Q9Y6H3 246 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 LY6G6EA0A0G2JKS1 128 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF850A8MQ14 1090 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 NPIPB9F8W1W9 429 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 WDR1O75083 606 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SERPINA2P20848 420 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 PPP5CP53041 499 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 LTBQ06643 244 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SNTB2Q13425 540 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 CDNFQ49AH0 187 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 CNIH2Q6PI25 160 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DRAM2Q6UX65 266 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 AKR7LQ8NHP1 331 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ABHD3Q8WU67 409 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SGCDQ92629 289 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 UCN2Q96RP3 112 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 GPR84Q9NQS5 396 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 NDUFB11Q9NX14 153 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 HAO2Q9NYQ3 351 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 MRPS28Q9Y2Q9 187 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 U3KQA8 63 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ISPDA4D126 451 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 B4DXG7 233 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 NTN1O95631 604 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ASAH2BP0C7U1 165 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 UGT2B10P36537 528 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 CLDN20P56880 219 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 RAB14P61106 215 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 PMP22Q01453 160 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 MESTQ5EB52 335 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DTX3Q8N9I9 347 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 CPEB3Q8NE35 698 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 RTL8AQ9BWD3 113 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 NAA50Q9GZZ1 169 aaKnown RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 PCDHB10Q9UN67 800 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 EDARQ9UNE0 448 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ALPK3Q96L96 1907 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SVILO95425 2214 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 MUC6Q6W4X9 2439 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 TEX13DA0A0J9YY54 714 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SPCS2Q15005 226 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SFXN4Q6P4A7 337 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 TRILQ7L0X0 811 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 BHLHE23Q8NDY6 225 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 SMAP2Q8WU79 429 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-204ENST00000397606 TMEM59Q9BXS4 323 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ABCG5Q9H222 651 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 DECR2Q9NUI1 292 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF391Q9UJN7 358 aa7.38□□□□□ -1.23
PTPRD-204ENST00000397606 MAGEB4O15481 346 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PTP4A3O75365 173 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 SMIM18P0DKX4 95 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 GABRR1P24046 479 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF121P58317 390 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LSM6P62312 80 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 CREB3L2Q70SY1 520 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ASCL5Q7RTU5 278 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 NPEPL1Q8NDH3 523 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 OR56B1Q8NGI3 324 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 FUZQ9BT04 418 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 OR2B2Q9GZK3 357 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 HEATR5BQ9P2D3 2071 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 DENND4CQ5VZ89 1909 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms