RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 RAB3BP20337 219 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 CLDN8P56748 225 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 GINS1Q14691 196 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 HIKESHIQ53FT3 197 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 CT45A1Q5HYN5 189 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 NPSR1Q6W5P4 371 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 LRRC75AQ8NAA5 344 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 OR52E2Q8NGJ4 325 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 CT45A3Q8NHU0 189 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 FOXC2Q99958 501 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 ZYG11BQ9C0D3 744 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 SPNS1Q9H2V7 528 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 C8orf33Q9H7E9 229 aaPredicted RBP2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 EDA2RQ9HAV5 297 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 ISYNA1Q9NPH2 558 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 PXMP2Q9NR77 195 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 MTFP1Q9UDX5 166 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 RHBDD3Q9Y3P4 386 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 KCNE3Q9Y6H6 103 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 CARMIL3Q8ND23 1372 aa2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 GPATCH8Q9UKJ3 1502 aaKnown RBP2.83□□□□□ -1.96
RNU6-549P-201ENST00000384433 ARHGAP21Q5T5U3 1957 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 M0R3G1 203 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 BCKDKO14874 412 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 RAD51CO43502 376 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 RP2O75695 350 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 LSM8O95777 96 aaKnown RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 MAGP20916 626 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 F2RP25116 425 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 U2AF2P26368 475 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 RFC3P40938 356 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 KIR3DL2P43630 455 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 HERVK_113P61574 105 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 TCP10Q12799 353 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 ERCC8Q13216 396 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 GABRA6Q16445 453 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 SNRNP35Q16560 246 aaKnown RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 PGGHGQ32M88 737 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 TRMT5Q32P41 509 aaKnown RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 UBE2UQ5VVX9 321 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 SPESP1Q6UW49 350 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 CYB561D1Q8N8Q1 229 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 C8orf31Q8N9H6 132 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 NOXO1Q8NFA2 376 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 OR10G2Q8NGC3 310 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 OR5W2Q8NH69 310 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 CA5BP1Q8WTZ4 195 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 APH1BQ8WW43 257 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 MRGPRFQ96AM1 343 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 KIAA1143Q96AT1 154 aaPredicted RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 NEURL3Q96EH8 262 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 RNF145Q96MT1 663 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 SLC17A9Q9BYT1 436 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 OR2AG1Q9H205 316 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 SAV1Q9H4B6 383 aaPredicted RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 NTN4Q9HB63 628 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 LHX9Q9NQ69 397 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 MRPL22Q9NWU5 206 aaKnown RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 ZNF222Q9UK12 451 aa2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 TSSC4Q9Y5U2 329 aaPredicted RBP2.82□□□□□ -1.96
RNU6-549P-201ENST00000384433 GABRPO00591 440 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 NME4O00746 187 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 CASC3O15234 703 aaKnown RBP2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 HLA-HP01893 362 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 HBE1P02100 147 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 CD3GP09693 182 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 RAB7AP51149 207 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 RAP1AP62834 184 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 CDH17Q12864 832 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 DGCR6Q14129 220 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 FAM83EQ2M2I3 478 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 MBOAT2Q6ZWT7 520 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 MRPL55Q7Z7F7 128 aaKnown RBP2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 MICU2Q8IYU8 434 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 JAGN1Q8N5M9 183 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 GLYATL2Q8WU03 294 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 TMEM230Q96A57 120 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 UQCC2Q9BRT2 126 aa2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 UBE2ZQ9H832 354 aaPredicted RBP2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 COL22A1Q8NFW1 1626 aaPredicted RBP2.81□□□□□ -1.96
RNU6-549P-201ENST00000384433 NACAE9PAV3 2078 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 MROH7-TTC4A0A0A0MT08 1334 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 MROH7Q68CQ1 1323 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 IGLV3-16A0A075B6K0 115 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 IGKV1-8A0A0C4DH67 115 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 TSPAN11A1L157 253 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 ZNF99A8MXY4 864 aaPredicted RBP2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 HLA-DPB1P04440 258 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 RETP07949 1114 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 RALBP11234 206 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 GABRG2P18507 467 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 PGAM1P18669 254 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 CCT6AP40227 531 aaKnown RBP2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 MAGEA1P43355 309 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 SLC11A1P49279 550 aa2.8□□□□□ -1.96
RNU6-549P-201ENST00000384433 PPP1CBP62140 327 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms