RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 A0A0G2JMP0 313 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 A0A0X1KG70 313 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 ISPDA4D126 451 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 UNC119BA6NIH7 251 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 SOCS2O14508 198 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 CDKN2AP42771 156 aaKnown RBP12.04□□□□□ -0.48
NELFE-201ENST00000375425 HNRNPA0Q13151 305 aaKnown RBP12.04□□□□□ -0.48
NELFE-201ENST00000375425 SCGB2A2Q13296 93 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 CCDC92Q53HC0 331 aaPredicted RBP12.04□□□□□ -0.48
NELFE-201ENST00000375425 C1orf94Q6P1W5 598 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 Q6ZR03 302 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 PEG10Q86TG7 708 aaKnown RBP12.04□□□□□ -0.48
NELFE-201ENST00000375425 NPEPL1Q8NDH3 523 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 OR4M2Q8NGB6 313 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 TMPRSS13Q9BYE2 586 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 GORASP2Q9H8Y8 452 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
NELFE-201ENST00000375425 PURGQ9UJV8 347 aaKnown RBP12.04□□□□□ -0.48
NELFE-201ENST00000375425 A0A0A6YYJ9 748 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 OR6C6A6NF89 314 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 RER1O15258 196 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 RGS9O75916 674 aaPredicted RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 TXNDC12O95881 172 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 KITLGP21583 273 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 TNFSF4P23510 183 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 RBMXP38159 391 aaKnown RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 RPS6KA3P51812 740 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 DCAF12L2Q5VW00 463 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 SMARCD3Q6STE5 483 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 ADCK1Q86TW2 530 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 OR2Z1Q8NG97 314 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 OR1F12Q8NHA8 337 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 HAVCR1Q96D42 359 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 PYURFQ96I23 114 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 DHRS1Q96LJ7 313 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 SAMD8Q96LT4 415 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 TSSK2Q96PF2 358 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 DCLRE1CQ96SD1 692 aaKnown RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 FUZQ9BT04 418 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 KRCC1Q9NPI7 259 aaPredicted RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 DCAF16Q9NXF7 216 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 NPTNQ9Y639 398 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 V9GYQ6 96 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 HAX1O00165 279 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 DCTN6O00399 190 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 SNX3O60493 162 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 GPANK1O95872 356 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 DBHP09172 617 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 SBK2P0C263 348 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 CENPAP49450 140 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 KCNMB1Q16558 191 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 COG8Q96MW5 612 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 ERMAPQ96PL5 475 aaPredicted RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
NELFE-201ENST00000375425 TMEM106BQ9NUM4 274 aa12.03□□□□□ -0.48
NELFE-201ENST00000375425 NBEAL1Q6ZS30 2694 aa12.02□□□□□ -0.48
NELFE-201ENST00000375425 J3QLI3 93 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 GADD45GO95257 159 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 PPP1R3DO95685 299 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 SEMG1P04279 462 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 ADRA2CP18825 462 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 TNFRSF1AP19438 455 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 EPHA1P21709 976 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 GATA3P23771 443 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 CRABP1P29762 137 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 MSX2P35548 267 aaPredicted RBP12.02□□□□□ -0.49
NELFE-201ENST00000375425 ERFP50548 548 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 SMIM11AP58511 58 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 LCN2P80188 198 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 HLXQ14774 488 aaPredicted RBP12.02□□□□□ -0.49
NELFE-201ENST00000375425 MEP1BQ16820 701 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 RFX4Q33E94 735 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 CPLX4Q7Z7G2 160 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.02□□□□□ -0.49
NELFE-201ENST00000375425 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 SEMA6DQ8NFY4 1073 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 C7orf69Q9H7B7 122 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 B9D1Q9UPM9 204 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 POLR1DQ9Y2S0 133 aa12.02□□□□□ -0.49
NELFE-201ENST00000375425 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 IGHV2-70P01814 119 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 HSD17B1P14061 328 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 RAC2P15153 192 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
NELFE-201ENST00000375425 RGS6P49758 472 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 SPIBQ01892 262 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 DBPQ10586 325 aaPredicted RBP12.01□□□□□ -0.49
NELFE-201ENST00000375425 LEG1Q6P5S2 330 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 USP43Q70EL4 1123 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
NELFE-201ENST00000375425 OR6V1Q8N148 313 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms