RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 F10P00742 488 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 ICAM2P13598 275 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 POU3F4P49335 361 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 EFNB2P52799 333 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 KLF9Q13886 244 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 TMEM81Q6P7N7 255 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR51A2Q8NGJ7 313 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 FCAMRQ8WWV6 532 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 TAAR9Q96RI9 348 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 KCNK15Q9H427 330 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 SH2D2AQ9NP31 389 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 MCUBQ9NWR8 336 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 ASH2LQ9UBL3 628 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 EXPH5Q8NEV8 1989 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 A0A0A6YYJ9 748 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 C3orf80F5H4A9 247 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GABARAPH6UMI1 98 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CDX4O14627 284 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 LMX1BO60663 402 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CBR3O75828 277 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 DHFRP00374 187 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 IGHEP01854 428 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CD63P08962 238 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 MMP16P51512 607 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GPR85P60893 370 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 H3F3AP84243 136 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SPOCK1Q08629 439 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SSPNQ14714 243 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 C2orf76Q3KRA6 126 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GLYATL3Q5SZD4 288 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 KLHL24Q6TFL4 600 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 ZNF704Q6ZNC4 412 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 CFAP77Q6ZQR2 320 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 LUZP2Q86TE4 346 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR10S1Q8NGN2 331 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR2AJ1Q8NGZ0 328 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 FAM3DQ96BQ1 224 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SGCZQ96LD1 299 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GAL3ST1Q99999 423 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 P4HTMQ9NXG6 502 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 NKIRAS2Q9NYR9 191 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GDF2Q9UK05 429 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CPAMD8Q8IZJ3 1885 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 A0A0G2JMM0 328 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PPB8 328 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PRS3 328 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 KIR3DP1A8MWS1 328 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 C9orf172C9J069 976 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 SLC17A2O00624 439 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 RER1O15258 196 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 KRT33AO76009 404 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 P04436 131 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ISG15P05161 165 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 CD59P13987 128 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 CSRP1P21291 193 aaKnown RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 PRKXP51817 358 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TAS2R20P59543 309 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 RRAS2P62070 204 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 OC90Q02509 493 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 RAB11BQ15907 218 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ACER2Q5QJU3 275 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TMEM244Q5VVB8 128 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 GLT8D1Q68CQ7 371 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 HDDC2Q7Z4H3 204 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 PHF21AQ96BD5 680 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ZPBPQ9BS86 351 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TP63Q9H3D4 680 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 RABL2AQ9UBK7 228 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 RABL2BQ9UNT1 228 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TNFSF11O14788 317 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 XRCC3O43542 346 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 SULT1B1O43704 296 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TLX3O43711 291 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 GMDSO60547 372 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 KDM4BO94953 1096 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 PMS2P2O95744 297 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ENPP1P22413 925 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 HSD11B1P28845 292 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 BTG1P62324 171 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 GABREP78334 506 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 DYRK1AQ13627 763 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 TMEM255AQ5JRV8 349 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 SLC25A47Q6Q0C1 308 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 YRDCQ86U90 279 aaKnown RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 JAGN1Q8N5M9 183 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ESX1Q8N693 406 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 OR6N1Q8NGY5 312 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 ZNF775Q96BV0 537 aaPredicted RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 ZNF385AQ96PM9 386 aaKnown RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 CITED4Q96RK1 184 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 PIGQQ9BRB3 760 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 FAM206AQ9NX38 181 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 FOXJ2Q9P0K8 574 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 MYEF2Q9P2K5 600 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms