RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GSKIPQ9P0R6 139 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 hCG_1809904A0A1W2PP81 198 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 A0A1W2PR64 198 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 A0A1W2PRV1 198 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 H0YIZ8 118 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 PMP2P02689 132 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 CRHP06850 196 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 SMIM6P0DI80 62 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 CD79AP11912 226 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 PRPS1P60891 318 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-202ENST00000318266 MST1LQ2TV78 715 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 DEFB110Q30KQ9 67 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 FAM76BQ5HYJ3 339 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ACER2Q5QJU3 275 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 C5orf46Q6UWT4 87 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 PGAP1Q75T13 922 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ZNF563Q8TA94 476 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 MARCH1Q8TCQ1 289 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 EDARADDQ8WWZ3 215 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ASB13Q8WXK3 278 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 LPAR4Q99677 370 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 TEX101Q9BY14 249 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 CHRDQ9H2X0 955 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 EPHA6Q9UF33 1036 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 MYO9BQ13459 2157 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 IGKV1D-42A0A075B6H8 117 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 POM121BA6NF01 834 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 RNASEK-C17orf49H0YIS7 233 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 RDH16O75452 317 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ADH1CP00326 375 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 LPAR6P43657 344 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 S100A10P60903 97 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 RPL18Q07020 188 aaKnown RBP8.69□□□□□ -1.02
PTPRA-202ENST00000318266 RASGEF1BQ0VAM2 473 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 MGAT2Q10469 447 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 EBPQ15125 230 aaKnown RBP8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ZNF550Q7Z398 422 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 SLC25A42Q86VD7 318 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 PAQR4Q8N4S7 273 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-202ENST00000318266 OR51F2Q8NH61 342 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 MITD1Q8WV92 249 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 EDAQ92838 391 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 SULT4A1Q9BR01 284 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 FGF22Q9HCT0 170 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-202ENST00000318266 OR5AC2Q9NZP5 309 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 CKLFQ9UBR5 152 aa8.69□□□□□ -1.02
PTPRA-202ENST00000318266 C17orf51A8MQB3 221 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 H0YGG7 62 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 OIP5O43482 229 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 IFNA6P05013 189 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 FAM157CP0CG43 387 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 ARF3P61204 181 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 ECH1Q13011 328 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SGCGQ13326 291 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 NCMAPQ5T1S8 102 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 ADAM5Q6NVV9 412 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 CBLN3Q6UW01 205 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 PARGQ86W56 976 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 DMBX1Q8NFW5 382 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SECTM1Q8WVN6 248 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 NECAB3Q96P71 396 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 TSPAN32Q96QS1 320 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 WDR77Q9BQA1 342 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 RNF126Q9BV68 326 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 LPAR3Q9UBY5 353 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 YBX2Q9Y2T7 364 aaKnown RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SPACA6W5XKT8 324 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 A0A1B0GV50 99 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 C5orf52A6NGY3 159 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 M0R036 132 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 NKX2-2O95096 273 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 OR6A2O95222 327 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 APBB3O95704 486 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 CTSBP07858 339 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 GNB3P16520 340 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SGCAQ16586 387 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 C9orf50Q5SZB4 431 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 DHRS11Q6UWP2 260 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 VITQ6UXI7 678 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 ZNF704Q6ZNC4 412 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 ABHD13Q7L211 337 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 PPP1R3BQ86XI6 285 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 WFIKKN2Q8TEU8 576 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SLC25A36Q96CQ1 311 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 KTI12Q96EK9 354 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 SMCO4Q9NRQ5 59 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 CYTL1Q9NRR1 136 aa8.68□□□□□ -1.02
PTPRA-202ENST00000318266 MRPS23Q9Y3D9 190 aaKnown RBP8.68□□□□□ -1.02
PTPRA-202ENST00000318266 A0A087WV62 115 aa8.67□□□□□ -1.02
PTPRA-202ENST00000318266 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
PTPRA-202ENST00000318266 ZNF432O94892 652 aa8.67□□□□□ -1.02
PTPRA-202ENST00000318266 LY86O95711 162 aa8.67□□□□□ -1.02
PTPRA-202ENST00000318266 AK1P00568 194 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms