RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 A0A1B0GUH1 482 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CD3DP04234 171 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 ITGA5P08648 1049 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 ASAH2BP0C7U1 165 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CALCBP10092 127 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CAPZBP47756 277 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTDP1-202ENST00000299543 SCGB2B2Q4G0G5 96 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 NAA40Q86UY6 237 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 HOXB13Q92826 284 aaPredicted RBP12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CMKLR1Q99788 373 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 M0QYG6 137 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 VSIG10L2P0DP72 767 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 GP1BBP13224 206 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 IFNGR1P15260 489 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PPP3CBP16298 524 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 DEFA6Q01524 100 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF684Q5T5D7 378 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 LINC00346Q8IVM7 164 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ARL5BQ96KC2 179 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 NUDT9Q9BW91 350 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PCDHGA1Q9Y5H4 931 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PNPP00491 289 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF14P17017 642 aaPredicted RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PRSS3P35030 304 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PPICP45877 212 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 SLC25A1P53007 311 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 RAB5BP61020 215 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TMEM205Q6UW68 189 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 STX12Q86Y82 276 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 SVBPQ8N300 66 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 FAM3DQ96BQ1 224 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 MICU1Q9BPX6 476 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 VPS13AQ96RL7 3174 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 URB1O60287 2271 aaKnown RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TUBAL3A6NHL2 446 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TMEM212A6NML5 194 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 IL33O95760 270 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 EIF2B1Q14232 305 aaKnown RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 TAF13Q15543 124 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 RAB11BQ15907 218 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ARHGEF39Q8N4T4 335 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 OR1S2Q8NGQ3 325 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 PAQR8Q8TEZ7 354 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
CTDP1-202ENST00000299543 DHDHQ9UQ10 334 aa12.1□□□□□ -0.47
CTDP1-202ENST00000299543 A0A1W2PPC4 97 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 NDUFB6O95139 128 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 ABHD16AO95870 558 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 CASP6P55212 293 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 ELOCQ15369 112 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 B3GNTL1Q67FW5 361 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 UNQ6126/PRO20091Q6UXV3 157 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 GPR37O15354 613 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 CTAG2O75638 210 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 CTLA4P16410 223 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 TMEM71Q6P5X7 295 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 C4orf45Q96LM5 186 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 TLNRD1Q9H1K6 362 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 MED9Q9NWA0 146 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 RNF215Q9Y6U7 377 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 XRCC3O43542 346 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 HLA-DOBP13765 273 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 ADH6P28332 368 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 DNASE1L1P49184 302 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 OR1D5P58170 312 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 HABP2Q14520 560 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 EEF1A1P5Q5VTE0 462 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 MAMDC2Q7Z304 686 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 TSTD1Q8NFU3 115 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 OTOSQ8NHW6 89 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 SLC46A1Q96NT5 459 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms