RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 RHOUQ7L0Q8 258 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 SYT9Q86SS6 491 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 TMEM106AQ96A25 262 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 FAM173AQ9BQD7 235 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 SF3B5Q9BWJ5 86 aaKnown RBP13.61□□□□□ -0.23
SF3B4-201ENST00000271628 GHITMQ9H3K2 345 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 IL17BQ9UHF5 180 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 ING4Q9UNL4 249 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 R4GMQ9 66 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 V9GY05 133 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 A0A0G2JMM0 328 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 A0A1W2PPB8 328 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 A0A1W2PRS3 328 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 LRRC3CA6NJW4 275 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 IFITM5A6NNB3 132 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 KIR3DP1A8MWS1 328 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 AIPO00170 330 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 TRAPPC6AO75865 159 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 H2BFMP0C1H6 154 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 STOMP27105 288 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 GUCA1AP43080 201 aaPredicted RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CLDN17P56750 224 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 GABREP78334 506 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 BCL2L15Q5TBC7 163 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 STAC2Q6ZMT1 411 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 YRDCQ86U90 279 aaKnown RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CATSPERDQ86XM0 798 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 RNF133Q8WVZ7 376 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 YIPF5Q969M3 257 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 PRRX2Q99811 253 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 RANBP3Q9H6Z4 567 aaPredicted RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 SEC61A2Q9H9S3 476 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 BRD7Q9NPI1 651 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF275Q9NSD4 429 aaPredicted RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 DEPPQ9NTK1 212 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 GTF2A1LQ9UNN4 478 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CAMK2AQ9UQM7 478 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 A0A1W2PPL8 197 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 A6NIN4 97 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 TNFSF11O14788 317 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CTDSPLO15194 276 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 NEURL1O76050 574 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 PNPP00491 289 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 TCRBP04435 133 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 QDPRP09417 244 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 RFPL3SP0C7P2 107 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 GDF1P27539 372 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 MAGEB1P43366 347 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 SOX2P48431 317 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CD276Q5ZPR3 534 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 LAMTOR1Q6IAA8 161 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 CDH24Q86UP0 819 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 DTX1Q86Y01 620 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 LINC00346Q8IVM7 164 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF433Q8N7K0 673 aaPredicted RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 ADAMTS14Q8WXS8 1223 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 INTS12Q96CB8 462 aaKnown RBP13.6□□□□□ -0.23
SF3B4-201ENST00000271628 SFXN2Q96NB2 322 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 OR2M2Q96R28 347 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 EMC7Q9NPA0 242 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 PTTG3PQ9NZH4 202 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 B4GALT7Q9UBV7 327 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 HSPB11Q9Y547 144 aa13.6□□□□□ -0.23
SF3B4-201ENST00000271628 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 HTR2BP41595 481 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 MMP16P51512 607 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 CARD18P57730 90 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 TCF15Q12870 199 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 KCNMB1Q16558 191 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF782Q6ZMW2 699 aaPredicted RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 DTX3Q8N9I9 347 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 OR5H6Q8NGV6 325 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 OR2AJ1Q8NGZ0 328 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SLAMF6Q96DU3 332 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SMAD5Q99717 465 aaKnown RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SLC25A18Q9H1K4 315 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 GLTPQ9NZD2 209 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 A0A087WV48 116 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 TMEM269A0A1B0GVZ9 245 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 EIF1AYO14602 144 aaKnown RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SRSF10O75494 262 aaKnown RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ISG15P05161 165 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ENPP1P22413 925 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SRP9P49458 86 aaKnown RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 FOXO1Q12778 655 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 FCN2Q15485 313 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ODF4Q2M2E3 257 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 KLHL24Q6TFL4 600 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF704Q6ZNC4 412 aaPredicted RBP13.59□□□□□ -0.23
SF3B4-201ENST00000271628 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SNAPC3Q92966 411 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms