RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 YES1P07947 543 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 OCM2P0CE71 109 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 SRMP19623 302 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 OR10A3P58181 314 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 HIST1H3AP68431 136 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 ODF4Q2M2E3 257 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 HIST2H3PS2Q5TEC6 136 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 TSPO2Q5TGU0 170 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF544Q6NX49 715 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 HIST2H3AQ71DI3 136 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 CCDC190Q86UF4 302 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
HDHD3-201ENST00000238379 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 ATF6BQ99941 703 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 SLCO5A1Q9H2Y9 848 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 GPR35Q9HC97 309 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 TMEM38BQ9NVV0 291 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 FAM206AQ9NX38 181 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 MKRN2OSH3BPM6 223 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 K7ENP7 123 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 NPR2P20594 1047 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 MAPK3P27361 379 aaPredicted RBP13.39□□□□□ -0.27
HDHD3-201ENST00000238379 TNFSF8P32971 234 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 ETV6P41212 452 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 CEACAM16Q2WEN9 425 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 CEP78Q5JTW2 689 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 INO80CQ6PI98 192 aaPredicted RBP13.39□□□□□ -0.27
HDHD3-201ENST00000238379 SYT9Q86SS6 491 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 LRRC18Q8N456 261 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 MIXL1Q9H2W2 232 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 OR52A1Q9UKL2 312 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF175Q9Y473 711 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 TRBV5-7A0A0A0MS05 114 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 SLC22A20A6NK97 555 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 TAF4O00268 1085 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 RGS5O15539 181 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 RAB3BP20337 219 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 CFL1P23528 166 aaKnown RBP13.39□□□□□ -0.27
HDHD3-201ENST00000238379 SOX2P48431 317 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 KLHL24Q6TFL4 600 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 ADGRE4PQ86SQ3 457 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 LAX1Q8IWV1 398 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 GJC3Q8NFK1 279 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 FBXO17Q96EF6 278 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 WDFY2Q96P53 400 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 FOXB1Q99853 325 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 ZCCHC4Q9H5U6 513 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 ABCB9Q9NP78 766 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
HDHD3-201ENST00000238379 CMAHPQ9Y471 501 aa13.39□□□□□ -0.27
HDHD3-201ENST00000238379 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 PIEZO1Q92508 2521 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 IGHV3-9P01782 118 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 RAF1P04049 648 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 ISG15P05161 165 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 CTSSP25774 331 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF45Q02386 682 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 SFXN4Q6P4A7 337 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 PALMDQ9NP74 551 aa13.38□□□□□ -0.27
HDHD3-201ENST00000238379 OR6C65A6NJZ3 312 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 H3BSH0 61 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 RPL36A-HNRNPH2H7BZ11 118 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 RRP8O43159 456 aaKnown RBP13.37□□□□□ -0.27
HDHD3-201ENST00000238379 ZNHIT1O43257 154 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 CST2P09228 141 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 B4GALT1P15291 398 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 HSD11B1P28845 292 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 THBS2P35442 1172 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 PPP5CP53041 499 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
HDHD3-201ENST00000238379 TAF13Q15543 124 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
HDHD3-201ENST00000238379 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
HDHD3-201ENST00000238379 NUFIP2Q7Z417 695 aaKnown RBP13.37□□□□□ -0.27
HDHD3-201ENST00000238379 CROCCP3Q8IVE0 287 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 ELMOD2Q8IZ81 293 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 TMEM106AQ96A25 262 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 SH3GL3Q99963 347 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 SLC30A2Q9BRI3 323 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 GP6Q9HCN6 339 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 BRD7Q9NPI1 651 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 B3GNT3Q9Y2A9 372 aa13.37□□□□□ -0.27
HDHD3-201ENST00000238379 KRT33AO76009 404 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 TTRP02766 147 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 CD40LGP29965 261 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 PRKXP51817 358 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 PLEKHN1Q494U1 663 aaPredicted RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SPANXN2Q5MJ10 180 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 IDNKQ5T6J7 187 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms