RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LZTS2Q9BRK4 669 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 SLC25A2Q9BXI2 301 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 SLC25A39Q9BZJ4 359 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-213ENST00000622183 SLC7A5P2Q9GIP4 190 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 ISYNA1Q9NPH2 558 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 TMEM9BQ9NQ34 198 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 MYEF2Q9P2K5 600 aaKnown RBP3.19□□□□□ -1.9
CPNE3-213ENST00000622183 PEF1Q9UBV8 284 aaKnown RBP3.19□□□□□ -1.9
CPNE3-213ENST00000622183 UBN2Q6ZU65 1347 aa3.19□□□□□ -1.9
CPNE3-213ENST00000622183 IGLV1-36A0A0B4J1U3 117 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 RAD51CO43502 376 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 FCN3O75636 299 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 FLOT1O75955 427 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 HBE1P02100 147 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 FABP3P05413 133 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 CLTAP09496 248 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 SLC1A2P43004 574 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 CLDN18P56856 261 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 KLHL40Q2TBA0 621 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 IGFL2Q6UWQ7 119 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 OR56A4Q8NGH8 313 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 SRSF12Q8WXF0 261 aaKnown RBP3.18□□□□□ -1.9
CPNE3-213ENST00000622183 TMEM230Q96A57 120 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 GALNT14Q96FL9 552 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 COL21A1Q96P44 957 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 OPALINQ96PE5 141 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 TMEM38AQ9H6F2 299 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 BEX1Q9HBH7 125 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 SLC40A1Q9NP59 571 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 CLN6Q9NWW5 311 aa3.18□□□□□ -1.9
CPNE3-213ENST00000622183 LTBP1Q14766 1721 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 C11orf94C9JXX5 98 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 H0YC42 278 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 SLC9A3R1O14745 358 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-213ENST00000622183 LSM8O95777 96 aaKnown RBP3.17□□□□□ -1.9
CPNE3-213ENST00000622183 IFNW1P05000 195 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 GGT1P19440 569 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
CPNE3-213ENST00000622183 CEACAM6P40199 344 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 RAB11AP62491 216 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 DOC2AQ14183 400 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 GINS1Q14691 196 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 QPRTQ15274 297 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 RAB11BQ15907 218 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 HIKESHIQ53FT3 197 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 AGBL2Q5U5Z8 902 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 TTC19Q6DKK2 380 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-213ENST00000622183 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 C12orf56Q8IXR9 622 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 Q8N976 141 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 ZFP90Q8TF47 636 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 NOX3Q9HBY0 568 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 ACP6Q9NPH0 428 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 PXMP2Q9NR77 195 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 AGPAT4Q9NRZ5 378 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 UVRAGQ9P2Y5 699 aa3.17□□□□□ -1.9
CPNE3-213ENST00000622183 MN1Q10571 1320 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-213ENST00000622183 TDRD6O60522 2096 aaKnown RBP3.16□□□□□ -1.9
CPNE3-213ENST00000622183 GTF3C1Q12789 2109 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-213ENST00000622183 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 TSPAN11A1L157 253 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 A6NDN8 102 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 INS-IGF2F8WCM5 200 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 BCKDKO14874 412 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 PRPS2P11908 318 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 ATF6P18850 670 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 CEACAM3P40198 252 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 IFT88Q13099 833 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 TPTE2P1Q5T6R2 138 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 TSPO2Q5TGU0 170 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 GPR107Q5VW38 600 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 ARL9Q6T311 187 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 FAM92BQ6ZTR7 304 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 MBOAT2Q6ZWT7 520 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 APH1BQ8WW43 257 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 MRGPRFQ96AM1 343 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 CEP170P1Q96L14 293 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 BMFQ96LC9 184 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 C9orf72Q96LT7 481 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 BLZF1Q9H2G9 400 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 IFI27L2Q9H2X8 130 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 CLSTN2Q9H4D0 955 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 C8orf33Q9H7E9 229 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-213ENST00000622183 RCL1Q9Y2P8 373 aaKnown RBP3.16□□□□□ -1.9
CPNE3-213ENST00000622183 MROH7-TTC4A0A0A0MT08 1334 aa3.16□□□□□ -1.9
CPNE3-213ENST00000622183 CROCCQ5TZA2 2017 aa3.15□□□□□ -1.9
CPNE3-213ENST00000622183 A0A096LNJ9 63 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 IGHV5-51A0A0C4DH38 117 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 NCBP2LA6PVI3 153 aaKnown RBP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 TMX2-CTNND1H3BSU7 103 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 GABARAPO95166 117 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 HLA-DPB1P04440 258 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 RAB4AP20338 218 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 U2AF2P26368 475 aaKnown RBP eCLIP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 NBL1P41271 181 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms