RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 WNT9BO14905 357 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 TPD52L2O43399 206 aaKnown RBP15.99■□□□□ 0.15
PNKP-213ENST00000599543 CDC14BO60729 498 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 MSMBP08118 114 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 SLC9A3P48764 834 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 ERVK-25P63136 954 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 GLO1Q04760 184 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 TAF11Q15544 211 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 SGCAQ16586 387 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 MOGQ16653 247 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 ZBED5Q49AG3 693 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 C1orf146Q5VVC0 180 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 OR2T5Q6IEZ7 315 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 THSD4Q6ZMP0 1018 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 ASRGL1Q7L266 308 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 CLDN22Q8N7P3 220 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 CPEB3Q8NE35 698 aaKnown RBP15.99■□□□□ 0.15
PNKP-213ENST00000599543 OR1J1Q8NGS3 322 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 OR2T29Q8NH02 315 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 OR51F2Q8NH61 342 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 SLCO4A1Q96BD0 722 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 DECR2Q9NUI1 292 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 HIF1ANQ9NWT6 349 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 TREM2Q9NZC2 230 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 ADAM18Q9Y3Q7 739 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 GRIP1Q9Y3R0 1128 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 SAMHD1Q9Y3Z3 626 aaKnown RBP15.99■□□□□ 0.15
PNKP-213ENST00000599543 UGT2A1Q9Y4X1 527 aa15.99■□□□□ 0.15
PNKP-213ENST00000599543 HTR3EA5X5Y0 456 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 FAM157AC9JC47 383 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 H7C1C5 153 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 CST1P01037 141 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 GAAP10253 952 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 ZNF32P17041 273 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 RPL4P36578 427 aaKnown RBP15.98■□□□□ 0.15
PNKP-213ENST00000599543 FXYD6P3P58550 94 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 LCN6P62502 163 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 TEKQ02763 1124 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 PGBD2Q6P3X8 592 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 UNQ6126/PRO20091Q6UXV3 157 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 NABP1Q96AH0 204 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 NMD3Q96D46 503 aaKnown RBP15.98■□□□□ 0.15
PNKP-213ENST00000599543 ALG12Q9BV10 488 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 REEP1Q9H902 201 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 NKIRAS2Q9NYR9 191 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 EIF3KQ9UBQ5 218 aaKnown RBP15.98■□□□□ 0.15
PNKP-213ENST00000599543 METRNQ9UJH8 293 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 SIGLEC7Q9Y286 467 aa15.98■□□□□ 0.15
PNKP-213ENST00000599543 IGKV1D-43A0A0B4J1Z2 117 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 IGHV1-69-2A0A0G2JMI3 117 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 C5orf49A4QMS7 147 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 HAX1O00165 279 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 FKBP6O75344 327 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 CCNB2O95067 398 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 GCH1P30793 250 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 GUCA1AP43080 201 aaPredicted RBP15.97■□□□□ 0.15
PNKP-213ENST00000599543 RPL27P61353 136 aaKnown RBP15.97■□□□□ 0.15
PNKP-213ENST00000599543 THEM4Q5T1C6 240 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 FAM205BPQ63HN1 556 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 SHQ1Q6PI26 577 aaKnown RBP15.97■□□□□ 0.15
PNKP-213ENST00000599543 TMEM179BQ7Z7N9 219 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 FNDC8Q8TC99 324 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 RBP7Q96R05 134 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 SAP30LQ9HAJ7 183 aa15.97■□□□□ 0.15
PNKP-213ENST00000599543 PLSCR5A0PG75 271 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 PTP4A3O75365 173 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 TIPRLO75663 272 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 IGHV3-13P01766 116 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 IGHMP01871 453 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 CRYBB2P43320 205 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 GDI2P50395 445 aaKnown RBP15.96■□□□□ 0.15
PNKP-213ENST00000599543 MVKQ03426 396 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 DBPQ10586 325 aaPredicted RBP15.96■□□□□ 0.15
PNKP-213ENST00000599543 SCGB2A2Q13296 93 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 ZNF718Q3SXZ3 478 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 SPATA46Q5T0L3 261 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 AVPI1Q5T686 147 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 FAM27BQ5VT28 67 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 SLC25A47Q6Q0C1 308 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 USP51Q70EK9 711 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 ALDH16A1Q8IZ83 802 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 ZNF101Q8IZC7 436 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 HS3ST5Q8IZT8 346 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 AKR7LQ8NHP1 331 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 GNPDA2Q8TDQ7 276 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 GTF3AQ92664 365 aaKnown RBP15.96■□□□□ 0.15
PNKP-213ENST00000599543 RASD2Q96D21 266 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 POM121L2Q96KW2 1035 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 Q96M85 177 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 OCEL1Q9H607 264 aa15.96■□□□□ 0.15
PNKP-213ENST00000599543 METTL17Q9H7H0 456 aaPredicted RBP15.96■□□□□ 0.15
PNKP-213ENST00000599543 KRCC1Q9NPI7 259 aaPredicted RBP15.96■□□□□ 0.15
PNKP-213ENST00000599543 TANC2Q9HCD6 1990 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 CLDN25C9JDP6 229 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 GNGT2O14610 69 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 IMPA2O14732 288 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 CIB2O75838 187 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 KRT36O76013 467 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 NDUFB2O95178 105 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 PPP1R3DO95685 299 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms