RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 GRK5P34947 590 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 UBE2NP61088 152 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 RPS16P62249 146 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 ARF1P84077 181 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 COX10Q12887 443 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 CRMP1Q14194 572 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 GINS1Q14691 196 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PPA1Q15181 289 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 TBRG1Q3YBR2 411 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 TMEM236Q5W0B7 351 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 SLC27A4Q6P1M0 643 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 DNM1P34Q6PK57 102 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PTCHD4Q6ZW05 846 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 FAM122BQ7Z309 247 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 TMEM200AQ86VY9 491 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 CYB561A3Q8NBI2 242 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PROKR2Q8NFJ6 384 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 OR52E2Q8NGJ4 325 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 OR9Q1Q8NGQ5 310 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 OR1K1Q8NGR3 316 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 TMEM54Q969K7 222 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 MCHR2Q969V1 340 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 SLC38A2Q96QD8 506 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 NMNAT3Q96T66 252 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 TEX12Q9BXU0 123 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 PRRG3Q9BZD7 231 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 SEC61A2Q9H9S3 476 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 NRIP3Q9NQ35 241 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 RPRD1BQ9NQG5 326 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 ING3Q9NXR8 418 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 NDRG3Q9UGV2 375 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 BAIAP2Q9UQB8 552 aa5.6□□□□□ -1.51
VPS4B-205ENST00000591383 ANKRD17O75179 2603 aaKnown RBP5.6□□□□□ -1.51
VPS4B-205ENST00000591383 NBPF19A0A087WUL8 3843 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 IGKV1D-43A0A0B4J1Z2 117 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SLC22A23A1A5C7 686 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 OR5H1A6NKK0 313 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 FAM183AA6NL82 134 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF99A8MXY4 864 aaPredicted RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 CENPBD1B2RD01 187 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 M0R1B8 84 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 CASKO14936 926 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SLC16A7O60669 478 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 FARS2O95363 451 aaKnown RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GPANK1O95872 356 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 TXNDC12O95881 172 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 HLA-HP01893 362 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 HLA-DQA2P01906 255 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ALPLP05186 524 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GYPBP06028 91 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PPP3CBP16298 524 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 CTLA4P16410 223 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 IGFBP2P18065 325 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 CDAP32320 146 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PYCR1P32322 319 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PEX19P40855 299 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GUCA1AP43080 201 aaPredicted RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ZNF83P51522 516 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ALDH3A2P51648 485 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 RAD23AP54725 363 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PPP2R2BQ00005 443 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 NPRL3Q12980 569 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 TAB1Q15750 504 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GABRA6Q16445 453 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SGCAQ16586 387 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 OTPQ5XKR4 325 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 LPCAT4Q643R3 524 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 KDM4DQ6B0I6 523 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 OR7E24Q6IFN5 339 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ANKRD16Q6P6B7 361 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 NHLRC1Q6VVB1 395 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 ZBTB49Q6ZSB9 765 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PARP8Q8N3A8 854 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 LNX2Q8N448 690 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GALNT4Q8N4A0 578 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 C17orf78Q8N4C9 275 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SLC37A3Q8NCC5 494 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 OR6K6Q8NGW6 343 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 FAM81AQ8TBF8 368 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 FAM222BQ8WU58 562 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 MUCL1Q96DR8 90 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PIK3IP1Q96FE7 263 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 LRR1Q96L50 414 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SNX22Q96L94 193 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 TSSK2Q96PF2 358 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 RBP7Q96R05 134 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SH3GL3Q99963 347 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 C1QTNF6Q9BXI9 259 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 GABARAPL3Q9BY60 117 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 VCXQ9H320 206 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 MED20Q9H944 212 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 RNPEPL1Q9HAU8 725 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SLC25A19Q9HC21 320 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 SLC17A5Q9NRA2 495 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 CMC2Q9NRP2 79 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 TMEM38BQ9NVV0 291 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 IMPAD1Q9NX62 359 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms