RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PRSS35Q8N3Z0 413 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 OR10S1Q8NGN2 331 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 SNRNP27Q8WVK2 155 aaKnown RBP10.06□□□□□ -0.8
SMAD4-205ENST00000588745 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF837Q96EG3 531 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-205ENST00000588745 MED18Q9BUE0 208 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 GPR35Q9HC97 309 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 TMEM38BQ9NVV0 291 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF281Q9Y2X9 895 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 A3GALT2U3KPV4 340 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 LOC400499M0QZD8 3231 aa10.06□□□□□ -0.8
SMAD4-205ENST00000588745 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 OR14I1A6ND48 311 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 TMEM212A6NML5 194 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 OR4C45A6NMZ5 311 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 SRSF10O75494 262 aaKnown RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 GATBO75879 557 aaKnown RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 WISP2O76076 250 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 NPR2P20594 1047 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 AGTR1P30556 359 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 DCTDP32321 178 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 SDC2P34741 201 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CCR9P51686 369 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CXADRP78310 365 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 MXD1Q05195 221 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 MFGE8Q08431 387 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CEACAM16Q2WEN9 425 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF829Q3KNS6 432 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 PLEKHN1Q494U1 663 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF404Q494X3 552 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 ACSM3Q53FZ2 586 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 ZMAT1Q5H9K5 638 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 WDR38Q5JTN6 314 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 FAM27BQ5VT28 67 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 LINC00299Q6ZSB3 139 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 RHOUQ7L0Q8 258 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 P4HA3Q7Z4N8 544 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CEACAM19Q7Z692 300 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CATSPERDQ86XM0 798 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 OR5AK2Q8NH90 309 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 MCFD2Q8NI22 146 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 APH1AQ96BI3 265 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 FOXB1Q99853 325 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 NXF2Q9GZY0 626 aaKnown RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 COMMD4Q9H0A8 199 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 SNTG1Q9NSN8 517 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 CENPMQ9NSP4 180 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 LUZP4Q9P127 313 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 FBXL3Q9UKT7 428 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 R4GMQ9 66 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 LAMA5O15230 3695 aa10.05□□□□□ -0.8
SMAD4-205ENST00000588745 URB1O60287 2271 aaKnown RBP10.05□□□□□ -0.8
SMAD4-205ENST00000588745 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 A0A087WV48 116 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 SHISA3A0PJX4 238 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 LOC110117498-PIK3R3F6TDL0 507 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 CASKO14936 926 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 SS18L1O75177 396 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 KRT33AO76009 404 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 PNPP00491 289 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 CLEC2LP0C7M8 214 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 B4GALT1P15291 398 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 MYL9P24844 172 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 CALRP27797 417 aaKnown RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 MTNR1BP49286 362 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 PSMA6P60900 246 aaKnown RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 HIST1H3AP68431 136 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 ROR2Q01974 943 aaKnown RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 HIST2H3PS2Q5TEC6 136 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 FAM180AQ6UWF9 173 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 HIST2H3AQ71DI3 136 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 NUFIP2Q7Z417 695 aaKnown RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF676Q8N7Q3 588 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 IL17RDQ8NFM7 739 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 SLC25A46Q96AG3 418 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 GMPPAQ96IJ6 420 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 GPR137Q96N19 417 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 OR14A2Q96R54 314 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 TRIB1Q96RU8 372 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 MMP27Q9H306 513 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 NIPAL2Q9H841 368 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
SMAD4-205ENST00000588745 GLRX2Q9NS18 164 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 SLC7A10Q9NS82 523 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 GTF2A1LQ9UNN4 478 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 IGF2RP11717 2491 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
SMAD4-205ENST00000588745 A0A075B6Q4 140 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 TRBV5-5A0A0J9YX44 114 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 RPL36A-HNRNPH2H7BZ11 118 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 RER1O15258 196 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms