RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	C12orf10	Q9HB07	376 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	ADGRL4	Q9HBW9	690 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892		Q9N2J8	555 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	MKKS	Q9NPJ1	570 aa	Predicted RBP	6.58	□□□□□ -1.36
NF1-222	ENST00000582892	MEPE	Q9NQ76	525 aa	Predicted RBP	6.58	□□□□□ -1.36
NF1-222	ENST00000582892	RPRD1B	Q9NQG5	326 aa	Known RBP	6.58	□□□□□ -1.36
NF1-222	ENST00000582892	EXOSC3	Q9NQT5	275 aa	Known RBP	6.58	□□□□□ -1.36
NF1-222	ENST00000582892	C20orf141	Q9NUB4	165 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	MRPL39	Q9NYK5	338 aa	Known RBP	6.58	□□□□□ -1.36
NF1-222	ENST00000582892	FLRT3	Q9NZU0	649 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	ABRACL	Q9P1F3	81 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	HCN3	Q9P1Z3	774 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	COMMD3	Q9UBI1	195 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	RPS6KB2	Q9UBS0	482 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	CHRNA9	Q9UGM1	479 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	POU2F3	Q9UKI9	436 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	SLC6A5	Q9Y345	797 aa		6.58	□□□□□ -1.36
NF1-222	ENST00000582892	PRR14L	Q5THK1	2151 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892		A0A087WUJ7	227 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SHISA3	A0PJX4	238 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SERINC4	A6NH21	518 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF860	A6NHJ4	632 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	HSPB2	A8KAH6	182 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	FAM25A	B3EWG3	89 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	FAM25C	B3EWG5	89 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	FAM25G	B3EWG6	89 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	FAM47E-STBD1	D6RA91	191 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	HPGDS	O60760	199 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	DNAJB6	O75190	326 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ITGA10	O75578	1167 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	NTN1	O95631	604 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	CT62	P0C5K7	136 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	GKN3P	P0CG01	181 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PNMT	P11086	282 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ERP29	P30040	261 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	THBS2	P35442	1172 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	CYB561	P49447	251 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	DIO1	P49895	249 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	EMD	P50402	254 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	AGFG1	P52594	562 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	GBX2	P52951	348 aa	Predicted RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RAG2	P55895	527 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PRPS1	P60891	318 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RPS4X	P62701	263 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PITPNA	Q00169	270 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	IFITM2	Q01629	132 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF85	Q03923	595 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SERTAD2	Q14140	314 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	EXOSC7	Q15024	291 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	CDK10	Q15131	360 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	HSPB2	Q16082	182 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	TBRG1	Q3YBR2	411 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ALG10B	Q5I7T1	473 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	C1orf185	Q5T7R7	199 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PYHIN1	Q6K0P9	492 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SFXN4	Q6P4A7	337 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RPL22L1	Q6P5R6	122 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	KCTD20	Q7Z5Y7	419 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ATG4D	Q86TL0	474 aa	Predicted RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	NOXA1	Q86UR1	476 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RPS19BP1	Q86WX3	136 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	WFDC3	Q8IUB2	231 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ZFP41	Q8N8Y5	198 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ZFP62	Q8NB50	900 aa	Predicted RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	OR7G1	Q8NGA0	311 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	OR10H4	Q8NGA5	316 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	OR13C2	Q8NGS9	318 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	OR14A16	Q8NHC5	309 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ABHD4	Q8TB40	342 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	METTL21A	Q8WXB1	218 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SMPDL3B	Q92485	455 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	CNOT9	Q92600	299 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RNASE6	Q93091	150 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SGTB	Q96EQ0	304 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RBM18	Q96H35	190 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	SENP5	Q96HI0	755 aa	Predicted RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	RNF170	Q96K19	258 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PGLYRP3	Q96LB9	341 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892		Q96M66	194 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	DCLRE1C	Q96SD1	692 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	CNN2	Q99439	309 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	MNT	Q99583	582 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	NMNAT2	Q9BZQ4	307 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	NDEL1	Q9GZM8	345 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ISG20L2	Q9H9L3	353 aa	Known RBP	6.57	□□□□□ -1.36
NF1-222	ENST00000582892	MMP25	Q9NPA2	562 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	FBXO34	Q9NWN3	711 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	ALKBH4	Q9NXW9	302 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	EMC3	Q9P0I2	261 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	COPZ2	Q9P299	210 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892	PRODH2	Q9UF12	536 aa		6.57	□□□□□ -1.36
NF1-222	ENST00000582892		A0A0G2JK05	382 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	FAM240B	A0A1B0GVZ2	78 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	TUBAL3	A6NHL2	446 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	CD8B2	A6NJW9	211 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	FAM183A	A6NL82	134 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	NOTO	A8MTQ0	251 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF879	B4DU55	563 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892		H0YIG0	161 aa		6.56	□□□□□ -1.36
NF1-222	ENST00000582892	CTDSPL	O15194	276 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms