RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 TMEM14AQ9Y6G1 99 aa4.74□□□□□ -1.65
CAPN3-217ENST00000567817 ICE1Q9Y2F5 2266 aa4.74□□□□□ -1.65
CAPN3-217ENST00000567817 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 MYOFQ9NZM1 2061 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CENPEQ02224 2701 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LOC105369274A0A096LPK9 316 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LOC102723532A0A0G2JNH3 316 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 A0A1B0GVI7 797 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C7orf66A4D0T2 115 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SERINC4A6NH21 518 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CD8B2A6NJW9 211 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LRRN3E7EW58 273 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 INMT-MINDY4F8WBC2 141 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 TFECO14948 347 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SULT1B1O43704 296 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GSTZ1O43708 216 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 PRAF2O60831 178 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LDB3O75112 727 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 EML2O95834 649 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 DDAH2O95865 285 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LALBAP00709 142 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CSTAP01040 98 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 STATHP02808 62 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RAF1P04049 648 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 UCHL1P09936 223 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RAB40ALP0C0E4 278 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GKN3PP0CG01 181 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 UBL4AP11441 157 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 HPGDP15428 266 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 ARSBP15848 533 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RPL4P36578 427 aaKnown RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 MNDAP41218 407 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CAPZBP47756 277 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 EMDP50402 254 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 MMP15P51511 669 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 VSX2P58304 361 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RRAS2P62070 204 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RPS4XP62701 263 aaKnown RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SIRPAP78324 504 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 HOXC5Q00444 222 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 ZNF85Q03923 595 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 EIF3IQ13347 325 aaKnown RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 TNK1Q13470 666 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CRMP1Q14194 572 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 DAZAP2Q15038 168 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 ACSM3Q53FZ2 586 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CCNJQ5T5M9 372 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GPR139Q6DWJ6 353 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 FAAH2Q6GMR7 532 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 WBP2NLQ6ICG8 309 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C5orf46Q6UWT4 87 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LRRN1Q6UXK5 716 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CLEC9AQ6UXN8 241 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 WDR88Q6ZMY6 472 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CREB3L2Q70SY1 520 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SHFQ7M4L6 423 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OLIG3Q7RTU3 272 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 TAF8Q7Z7C8 310 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 HMGN2P46Q86SG4 172 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GKN2Q86XP6 184 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GATAD2AQ86YP4 633 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OR4N5Q8IXE1 308 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SLC35F3Q8IY50 421 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OR4N4Q8N0Y3 316 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GHDCQ8N2G8 530 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LRRC17Q8N6Y2 441 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 FAM71CQ8NEG0 241 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 BBS1Q8NFJ9 593 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LILRB4Q8NHJ6 448 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 PFN4Q8NHR9 129 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 TRMT10AQ8TBZ6 339 aaKnown RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SLC37A2Q8TED4 501 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SCARB1Q8WTV0 552 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 CNOT9Q92600 299 aaKnown RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 GHSRQ92847 366 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 PTP4A1Q93096 173 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RADILQ96JH8 1075 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C4orf36Q96KX1 117 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 PGLYRP3Q96LB9 341 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 NEDD4LQ96PU5 975 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OR2M2Q96R28 347 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OR1F2PQ96R84 312 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 HDHD2Q9H0R4 259 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 ABCG5Q9H222 651 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 MMP28Q9H239 520 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 OR51V1Q9H2C8 321 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SLC25A32Q9H2D1 315 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 LRRN3Q9H3W5 708 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C6orf106Q9H6K1 298 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 RANBP3Q9H6Z4 567 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-217ENST00000567817 MCCC2Q9HCC0 563 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 KLHL1Q9NR64 748 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 UBQLN4Q9NRR5 601 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 C20orf141Q9NUB4 165 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 IL20RAQ9UHF4 553 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
CAPN3-217ENST00000567817 SPATA2Q9UM82 520 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms