RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 LHX2P50458 406 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 AQP6Q13520 282 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 PSG5Q15238 335 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 SGCAQ16586 387 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ZBED5Q49AG3 693 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF658BQ4V348 819 aaPredicted RBP3.1□□□□□ -1.91
LINC00560-201ENST00000564593 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ARMC12Q5T9G4 340 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 CYB5R2Q6BCY4 276 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 NIPA1Q7RTP0 329 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 CTAGE6Q86UF2 777 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF429Q86V71 674 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 LRRC8AQ8IWT6 810 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 LINC00301Q8NCQ3 95 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 B3GNT7Q8NFL0 401 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 GPR151Q8TDV0 419 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF331Q9NQX6 463 aaPredicted RBP3.1□□□□□ -1.91
LINC00560-201ENST00000564593 RMND1Q9NWS8 449 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 TRMT112Q9UI30 125 aaKnown RBP3.1□□□□□ -1.91
LINC00560-201ENST00000564593 PHLPP2Q6ZVD8 1323 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 COL24A1Q17RW2 1714 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 BAZ2AQ9UIF9 1905 aaKnown RBP3.1□□□□□ -1.91
LINC00560-201ENST00000564593 ARHGAP21Q5T5U3 1957 aa3.1□□□□□ -1.91
LINC00560-201ENST00000564593 LOXHD1Q8IVV2 1947 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 DISP2A7MBM2 1401 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 NKX2-6A6NCS4 301 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 FAM166BA8MTA8 275 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 RNF13O43567 381 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 TOP1P11387 765 aaKnown RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 RORCP51449 518 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 FGF8P55075 233 aaPredicted RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 GPX6P59796 221 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 XKR7Q5GH72 579 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 COA6Q5JTJ3 125 aaKnown RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF836Q6ZNA1 936 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 MS4A15Q8N5U1 240 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ARIH2OSQ8N7S6 290 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 MNS1Q8NEH6 495 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 OR51G1Q8NGK1 321 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 OR52K2Q8NGK3 314 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 RAB3IL1Q8TBN0 382 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 CCDC12Q8WUD4 166 aaPredicted RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 GEMIN6Q8WXD5 167 aaKnown RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF799Q96GE5 643 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 HDHD3Q9BSH5 251 aaPredicted RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ILKAPQ9H0C8 392 aaPredicted RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ZNHIT6Q9NWK9 470 aaKnown RBP3.09□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF226Q9NYT6 803 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 PCYOX1Q9UHG3 505 aa3.09□□□□□ -1.91
LINC00560-201ENST00000564593 COL16A1Q07092 1604 aaPredicted RBP3.09□□□□□ -1.92
LINC00560-201ENST00000564593 NOTCH2Q04721 2471 aa3.09□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF532Q9HCE3 1301 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 TRBV6-6A0A0A6YYG2 114 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 A0A1B0GVI7 797 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF726A6NNF4 738 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 LAD1O00515 517 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 PEX7O00628 323 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 DLGAP1O14490 977 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 XKRYO14609 159 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 CA11O75493 328 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 EIF3GO75821 320 aaKnown RBP eCLIP3.08□□□□□ -1.92
LINC00560-201ENST00000564593 PSG2P11465 335 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 CNR1P21554 472 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 U2AF2P26368 475 aaKnown RBP eCLIP3.08□□□□□ -1.92
LINC00560-201ENST00000564593 NMUP48645 174 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 ACLYP53396 1101 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 PRMT2P55345 433 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 BEX3Q00994 111 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF92Q03936 586 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 SMARCB1Q12824 385 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 SRSF5Q13243 272 aaKnown RBP3.08□□□□□ -1.92
LINC00560-201ENST00000564593 GUCA2BQ16661 112 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 RESP18Q5W5W9 173 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 IGFL2Q6UWQ7 119 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 C6orf120Q7Z4R8 191 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 TMEM135Q86UB9 458 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 KRT222Q8N1A0 295 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 CCDC148Q8NFR7 591 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 ANKRD7Q92527 254 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 DNAJC19Q96DA6 116 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 OSBPL10Q9BXB5 764 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 VPS37BQ9H9H4 285 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 SLCO1B3Q9NPD5 702 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 CTPS2Q9NRF8 586 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 GNPTGQ9UJJ9 305 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 PRG3Q9Y2Y8 225 aaPredicted RBP3.08□□□□□ -1.92
LINC00560-201ENST00000564593 MYH7BA7E2Y1 1941 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 FOCADQ5VW36 1801 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 KIF13BQ9NQT8 1826 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 NHSQ6T4R5 1651 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 BCL9LQ86UU0 1499 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 CACNA1SQ13698 1873 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 SMCO3A2RU48 225 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 BOLA2-SMG1P6H3BVE0 249 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 PES1O00541 588 aaKnown RBP3.08□□□□□ -1.92
LINC00560-201ENST00000564593 ATP8B1O43520 1251 aa3.08□□□□□ -1.92
LINC00560-201ENST00000564593 STX10O60499 249 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms