RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 LINC00173Q6ZV60 143 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 MREGQ8N565 214 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CSGALNACT2Q8N6G5 542 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 OR4S2Q8NH73 311 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 WFIKKN1Q96NZ8 548 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TRAPPC4Q9Y296 219 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TSPAN11A1L157 253 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 RAD51CO43502 376 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 NEMFO60524 1076 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TGM6O95932 706 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 NR2C1P13056 603 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 RCC1P18754 421 aaPredicted RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 GPR1P46091 355 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CAV2P51636 162 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 LCN2P80188 198 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 RFX4Q33E94 735 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 PAGE3Q5JUK9 113 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ULK3Q6PHR2 472 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 MBOAT2Q6ZWT7 520 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CAMK2N1Q7Z7J9 78 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DCAF4L2Q8NA75 395 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 LINC01555Q8NAE3 123 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 GATSQ8NAP1 163 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 OR2L5Q8NG80 312 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ACTRT1Q8TDG2 376 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CLMPQ9H6B4 373 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 PATZ1Q9HBE1 687 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 BEX1Q9HBH7 125 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 KCNJ16Q9NPI9 418 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TMEM9BQ9NQ34 198 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DYRK4Q9NR20 520 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 SLC25A37Q9NYZ2 338 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ZNF282Q9UDV7 671 aaPredicted RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 ZMAT5Q9UDW3 170 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 MRPS18BQ9Y676 258 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 CLASP1Q7Z460 1538 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 GAPVD1Q14C86 1478 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 SYNJ1O43426 1573 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ABCC8Q09428 1581 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 PEG3Q9GZU2 1588 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 FHOD3Q2V2M9 1422 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 IGKV3D-20A0A0C4DH25 116 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 A0A1B0GW55 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 GSTTP1A0A1W2PQM5 241 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 PLAC8L1A1L4L8 177 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 SLC22A20A6NK97 555 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 NCBP2LA6PVI3 153 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 M0QX08 132 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 FLOT1O75955 427 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 LSM8O95777 96 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 INSP01308 110 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 IGKV3-15P01624 115 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L2P0CJ85 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L3P0CJ86 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L4P0CJ87 422 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L5P0CJ88 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L6P0CJ89 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L7P0CJ90 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 OR5H8P0DN80 308 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CALM1P0DP23 149 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CALM2P0DP24 149 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CALM3P0DP25 149 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CFHR2P36980 270 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TAF6P49848 677 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ZNF138P52744 262 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 NDPQ00604 133 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 MECOMQ03112 1051 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 WDR43Q15061 677 aaKnown RBP eCLIP1.77□□□□□ -2.13
CHD9-209ENST00000564255 CCNJQ5T5M9 372 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ANKRD22Q5VYY1 191 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4L9Q6RFH8 374 aaPredicted RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 ABHD13Q7L211 337 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 MYOCDQ8IZQ8 938 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 FAM71E2Q8N5Q1 922 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 NPWQ8N729 165 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 OR6X1Q8NH79 312 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CD300LFQ8TDQ1 290 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CA5BP1Q8WTZ4 195 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 EEF1AKMT3Q96AZ1 226 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 CREB3L1Q96BA8 519 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 LRRC39Q96DD0 335 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 GALNT14Q96FL9 552 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 RNF185Q96GF1 192 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 TSSK3Q96PN8 268 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 MRM3Q9HC36 420 aaKnown RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 LZTFL1Q9NQ48 299 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 DUX4Q9UBX2 424 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 ZNF629Q9UEG4 869 aaPredicted RBP1.77□□□□□ -2.13
CHD9-209ENST00000564255 CFAP45Q9UL16 551 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 HEBP2Q9Y5Z4 205 aa1.77□□□□□ -2.13
CHD9-209ENST00000564255 WDR97A6NE52 1622 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ABCC10Q5T3U5 1492 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 IGLV1-36A0A0B4J1U3 117 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 HAT1O14929 419 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 E2F6O75461 281 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 RAB3DO95716 219 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 HPRT1P00492 218 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 MBP02144 154 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ZDHHC11BP0C7U3 371 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms