RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CNTNAP1P78357 1384 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM2Q9UHN6 1383 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TRPM3Q9HCF6 1732 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TRBV7-9A0A0J9YWB2 115 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ERI2A8K979 691 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RAMP3O60896 148 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SRSF10O75494 262 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CIB2O75838 187 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 IFNA10P01566 189 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TCRBP04435 133 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SBK2P0C263 348 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SLC35G4P0C7Q5 338 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TCP1P17987 556 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 AOC1P19801 751 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 UQCRC2P22695 453 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CASP1P29466 404 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 AKT2P31751 481 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PHBP35232 272 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CFHR2P36980 270 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PSMD8P48556 350 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 EVX1P49640 407 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HMGCS2P54868 508 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 KCNK10P57789 538 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MAGOHP61326 146 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 BDH1Q02338 343 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 INCA1Q0VD86 236 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SMCO1Q147U7 214 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 FAM189A2Q15884 450 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 LPAL2Q16609 132 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GPR157Q5UAW9 335 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 KHDRBS2Q5VWX1 349 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SAXO2Q658L1 398 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR8G2PQ6IF36 304 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 NIPAL3Q6P499 406 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC137Q6PK04 289 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 Q7L0L9 218 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HDDC2Q7Z4H3 204 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM135Q86UB9 458 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 WDFY1Q8IWB7 410 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RIMKLAQ8IXN7 391 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RIBC1Q8N443 379 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ACBD4Q8NC06 268 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR9K2Q8NGE7 335 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR5B17Q8NGF7 314 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 NEK7Q8TDX7 302 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CA5BP1Q8WTZ4 195 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RNF133Q8WVZ7 376 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GHSRQ92847 366 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SLC38A4Q969I6 547 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PINX1Q96BK5 328 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TCEAL4Q96EI5 215 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 WFIKKN1Q96NZ8 548 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CCT8L2Q96SF2 557 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PYGO2Q9BRQ0 406 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM208Q9BTX3 173 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM109Q9BVC6 243 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 FUNDC2Q9BWH2 189 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PPA2Q9H2U2 334 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MIXL1Q9H2W2 232 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HRASLSQ9HDD0 168 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 UBE2TQ9NPD8 197 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PRSS16Q9NQE7 514 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PARVAQ9NVD7 372 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GHRLQ9UBU3 117 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR12D3Q9UGF7 316 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OPN4Q9UHM6 478 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HYOU1Q9Y4L1 999 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 FRMPD3Q5JV73 1810 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 KIF13AQ9H1H9 1805 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 BIVM-ERCC5R4GMW8 1640 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NOS1P29475 1434 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NUP153P49790 1475 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PRORSD1PA6NEY8 169 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SERPINE3A8MV23 424 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CLDN34H7C241 214 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 DLGAP1O14490 977 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IMPA2O14732 288 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SH2D1BO14796 132 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NBR2O15453 112 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 KLRC4O43908 158 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SCO1O75880 301 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NUDT14O95848 222 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MBD3O95983 291 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CST1P01037 141 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IGF2P01344 180 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IGHV3-9P01782 118 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 FOLR2P14207 255 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ETS2P15036 469 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HLA-GP17693 338 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CD40LGP29965 261 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 UGT1A5P35504 534 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SAA4P35542 130 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SLC1A2P43004 574 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 OMPP47874 163 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HTR5AP47898 357 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RGS4P49798 205 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PPT1P50897 306 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NDUFV3P56181 108 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SNAP25P60880 206 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms