RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ING4Q9UNL4 249 aa2.54□□□□□ -2
SCFD1-221ENST00000556534 ZNF99A8MXY4 864 aaPredicted RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 FAM25EA8MYX2 175 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 CDC7O00311 574 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 ZBTB5O15062 677 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 FCN3O75636 299 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 BGLAPP02818 100 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 UBCP0CG48 685 aaKnown RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 ZNF250P15622 560 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 CTRB1P17538 263 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 HMOX2P30519 316 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 UBE2AP49459 152 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 RORCP51449 518 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 SUB1P53999 127 aaKnown RBP eCLIP2.53□□□□□ -2
SCFD1-221ENST00000556534 CARD18P57730 90 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 DNAJC3Q13217 504 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 NKAIN1Q4KMZ8 207 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 LINC00483Q53H64 154 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 FAM86B1Q8N7N1 296 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 LRRC75AQ8NAA5 344 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 LYPD6BQ8NI32 183 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 ZNF502Q8TBZ5 544 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 CXorf40AQ8TE69 158 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 ZFP90Q8TF47 636 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 DNAJC19Q96DA6 116 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 XPO6Q96QU8 1125 aaKnown RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 ECSITQ9BQ95 431 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 RSPO3Q9BXY4 272 aaPredicted RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 UCK2Q9BZX2 261 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 ACTR3CQ9C0K3 210 aaPredicted RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 FBXO44Q9H4M3 255 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 MRPL47Q9HD33 250 aaKnown RBP2.53□□□□□ -2
SCFD1-221ENST00000556534 PXMP2Q9NR77 195 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 EXD2Q9NVH0 621 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 HRASLS2Q9NWW9 162 aa2.53□□□□□ -2
SCFD1-221ENST00000556534 NEURL4Q96JN8 1562 aa2.53□□□□□ -2.01
SCFD1-221ENST00000556534 CARMIL3Q8ND23 1372 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 A0A1B0GVI7 797 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 PRSS37A4D1T9 235 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF701M0R085 212 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 TRDMT1O14717 391 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 SIVA1O15304 175 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 CLDN11O75508 207 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 FOXH1O75593 365 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 CCNB2O95067 398 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 SCELO95171 688 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 OXTP01178 125 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 ZDHHC11BP0C7U3 371 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 TLX1NBP0CAT3 122 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 PRKACAP17612 351 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 MSR1P21757 451 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 OMGP23515 440 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 NBL1P41271 181 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 BCAP31P51572 246 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 CLDN18P56856 261 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 UBE2MP61081 183 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 ADARB1P78563 741 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 HMGCS1Q01581 520 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 SLC25A11Q02978 314 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 RAD51Q06609 339 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 ECH1Q13011 328 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 COA6Q5JTJ3 125 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 STUMQ69YW2 141 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 HDDC2Q7Z4H3 204 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 TMEM135Q86UB9 458 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 PDCL2Q8N4E4 241 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 OR2L8Q8NGY9 312 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 EXOSC8Q96B26 276 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 SLC7A5P2Q9GIP4 190 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 BEX1Q9HBH7 125 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 PRSS16Q9NQE7 514 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 MYEF2Q9P2K5 600 aaKnown RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 LGALS13Q9UHV8 139 aa2.52□□□□□ -2.01
SCFD1-221ENST00000556534 TET2Q6N021 2002 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-221ENST00000556534 PCM1Q15154 2024 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 UBN2Q6ZU65 1347 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 COL22A1Q8NFW1 1626 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 GLYATL1P3A0A0U1RQE8 302 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF816-ZNF321PA0A0X1KG74 233 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 TMEM150BA6NC51 233 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 F6UB75 175 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 H0YHG0 523 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 DYNC1I1O14576 645 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 BCKDKO14874 412 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 IFNW1P05000 195 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 MRPL3P09001 348 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ACSM4P0C7M7 580 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 EIF2S2P20042 333 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 OR1E1P30953 314 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ETV1P50549 477 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 NCBP2P52298 156 aaKnown RBP eCLIP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 UGT2B15P54855 530 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 RPS15AP62244 130 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 LY6EQ16553 131 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 C5orf47Q569G3 176 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 BEX5Q5H9J7 111 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 SPECC1LQ69YQ0 1117 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 FAM122BQ7Z309 247 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 CMC1Q7Z7K0 106 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms