RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TIMM22Q9Y584 194 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 CEPT1Q9Y6K0 416 aa4.11□□□□□ -1.75
ATXN3-228ENST00000554592 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PPIAL4EA0A075B759 164 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 DUXAA6NLW8 204 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PPIAL4DF5H284 164 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SCAMP2O15127 329 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF208O43345 1280 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SEC22BO75396 215 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 RSL1D1O76021 490 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 VAMP5O95183 116 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CSTAP01040 98 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 UBTFL6P0CB48 400 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PPIAL4FP0DN26 164 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CCNA2P20248 432 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 MYF6P23409 242 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 GLRXP35754 106 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 RAD52P43351 418 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PLTPP55058 493 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SH3BGRP55822 239 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TUBA1BP68363 451 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CAV1Q03135 178 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 C2orf54Q08AI8 447 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 LCP2Q13094 533 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SKP2Q13309 424 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SNTB2Q13425 540 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CASP8Q14790 479 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PTGR1Q14914 329 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SLC9A3R2Q15599 337 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TWIST1Q15672 202 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF141Q15928 474 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PDZK1Q5T2W1 519 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM225Q6GV28 225 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 LEG1Q6P5S2 330 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM154Q6P9G4 183 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 EMBQ6PCB8 327 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PAQR6Q6TCH4 344 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 LINGO2Q7L985 606 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PATL1Q86TB9 770 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 SPATA4Q8NEY3 305 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 OR9K2Q8NGE7 335 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 POP5Q969H6 163 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TMIGD2Q96BF3 282 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 MTERF3Q96E29 417 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF385AQ96PM9 386 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 KCNA7Q96RP8 456 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 RHOXF2Q9BQY4 288 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 MRPL37Q9BZE1 423 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 OR11A1Q9GZK7 315 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 BEX1Q9HBH7 125 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 CRLF2Q9HC73 371 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PDP1Q9P0J1 537 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 NUP50Q9UKX7 468 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF346Q9UL40 294 aaKnown RBP4.1□□□□□ -1.75
ATXN3-228ENST00000554592 PCDHGB4Q9UN71 923 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 KCNE3Q9Y6H6 103 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 EXPH5Q8NEV8 1989 aa4.1□□□□□ -1.75
ATXN3-228ENST00000554592 TMED7-TICAM2A0A0A6YYA0 188 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 H3BQF6 201 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RPL36A-HNRNPH2H7BZ11 118 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 SLC28A1O00337 649 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 SOCS2O14508 198 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 FCMRO60667 390 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 STX11O75558 287 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CRCPO75575 148 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 UPK3AO75631 287 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RP2O75695 350 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 UGT2B17O75795 530 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TSPAN9O75954 239 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 AK1P00568 194 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 IGHV2-5P01817 119 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 GPIP06744 558 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 INHBAP08476 426 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ARSBP15848 533 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF182P17025 639 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 GABRB1P18505 474 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PCGF2P35227 344 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PHBP35232 272 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CRYBB2P43320 205 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 SERPINB9P50453 376 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ATP4BP51164 291 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms