RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 MED11Q9P086 117 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.98□□□□□ -2.09
CPSF6-207ENST00000551516 PCTPQ9UKL6 214 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 KCNE3Q9Y6H6 103 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 PCLOQ9Y6V0 5065 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 NOTCH3Q9UM47 2321 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 TENM2Q9NT68 2774 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 TRBV5-5A0A0J9YX44 114 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 IQANK1A0A1B0GTG1 560 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SMIM30A4D0T7 59 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ANKDD1BA6NHY2 528 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SLC22A20A6NK97 555 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PMS2P5A8MQ11 134 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SNURFLB1AK76 121 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 E5RGE8 158 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PSMD12O00232 456 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 TP53I11O14683 189 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SLC22A2O15244 555 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 NPIPB7O75200 414 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CDH16O75309 829 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SH3BGRLO75368 114 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 RP2O75695 350 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 TRAPPC6AO75865 159 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 H6PDO95479 791 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CLPTM1O96005 669 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 IGLV2-11P01706 119 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SERPIND1P05546 499 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 KLK1P06870 262 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 YES1P07947 543 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 HIST1H2AGP0C0S8 130 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SLC2A2P11168 524 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 POU2F1P14859 743 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CPA3P15088 417 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 EVI2BP34910 448 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FEN1P39748 380 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 MAGEB1P43366 347 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 OR3A1P47881 315 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 OR3A2P47893 321 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FOXA1P55317 472 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 KRTAP10-3P60369 221 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 RAB10P61026 200 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ATP6V0D1P61421 351 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 LMO4P61968 165 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 RPS4XP62701 263 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 TRA2BP62995 288 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SKP1P63208 163 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 IRF8Q02556 426 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SRYQ05066 204 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 BSPH1Q075Z2 132 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 STX4Q12846 297 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 RBM39Q14498 530 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PDK3Q15120 406 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PPA1Q15181 289 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 GABRA6Q16445 453 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 NNATQ16517 81 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SGCBQ16585 318 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF239Q16600 458 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CHRFAM7AQ494W8 412 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 GTDC1Q4AE62 458 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 IFI44LQ53G44 452 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 UNC50Q53HI1 259 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ARMCX4Q5H9R4 360 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FAM120AOSQ5T036 256 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CPTPQ5TA50 214 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 OR52E8Q6IFG1 317 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 RNF165Q6ZSG1 346 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 Q6ZT83 130 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 MARCH3Q86UD3 253 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 MYPOPQ86VE0 399 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CARM1Q86X55 608 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 LRRC8AQ8IWT6 810 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 AQP12AQ8IXF9 295 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PEX5LQ8IYB4 626 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 TCAIMQ8N3R3 496 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZDHHC22Q8N966 263 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FBXO36Q8NEA4 188 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 GPR119Q8TDV5 335 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ABHD3Q8WU67 409 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 KCTD4Q8WVF5 259 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PIK3R3Q92569 461 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 LGALS12Q96DT0 336 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZBED6CLQ96FA7 236 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 C5orf30Q96GV9 206 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 AMDHD1Q96NU7 426 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FOXN4Q96NZ1 517 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF300Q96RE9 604 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 DOK1Q99704 481 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 NKX3-1Q99801 234 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CCDC77Q9BR77 488 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PELOQ9BRX2 385 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ALKBH7Q9BT30 221 aaPredicted RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PINK1Q9BXM7 581 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SHCBP1LQ9BZQ2 653 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ACTR6Q9GZN1 396 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SHARPINQ9H0F6 387 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 GLIPR2Q9H4G4 154 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ALG9Q9H6U8 611 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF696Q9H7X3 374 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ACTR8Q9H981 624 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FOLH1BQ9HBA9 442 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms