RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 OR6N2Q8NGY6 317 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 SGCDQ92629 289 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 LGALS12Q96DT0 336 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 RNFT2Q96EX2 444 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 OR2H1Q9GZK4 316 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 CRNNQ9UBG3 495 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-215ENST00000550828 GDF2Q9UK05 429 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-215ENST00000550828 AMDHD2Q9Y303 409 aa11.75□□□□□ -0.53
ERBB3-215ENST00000550828 RAI1Q7Z5J4 1906 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 FARS2O95363 451 aaKnown RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 IGLV1-44P01699 117 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 CAPZA2P47755 286 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 MTNR1AP48039 350 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 UBE2NP61088 152 aaKnown RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 AQP6Q13520 282 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 PPA1Q15181 289 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 PABPC1L2AQ5JQF8 200 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 C6orf141Q5SZD1 244 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF774Q6NX45 483 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 SSX6Q7RTT6 188 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 SLC16A9Q7RTY1 509 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 CPEB3Q8NE35 698 aaKnown RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 OR51G2Q8NGK0 314 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 RFKQ969G6 155 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 LRRC46Q96FV0 321 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 CNN2Q99439 309 aaKnown RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 PAK1IP1Q9NWT1 392 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 CRIM1Q9NZV1 1036 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 H2AFY2Q9P0M6 372 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-215ENST00000550828 LRRC42Q9Y546 428 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
ERBB3-215ENST00000550828 DCHS2Q6V1P9 2916 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 IGHV1-18A0A0C4DH31 117 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 C12orf71A8MTZ7 269 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 SLC1A7O00341 560 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 UBL3O95164 117 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 IGKV3-15P01624 115 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 CBR1P16152 277 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 PPP3CBP16298 524 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF823P16415 610 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 ANOS1P23352 680 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 COL8A1P27658 744 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF83P51522 516 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 IDH3GP51553 393 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 BLVRAP53004 296 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 RAB1AP62820 205 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 MVKQ03426 396 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 TMED1Q13445 227 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 RAB39AQ14964 217 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 GSG1Q2KHT4 349 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 RSPO1Q2MKA7 263 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 VASH1Q7L8A9 365 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 DCXRQ7Z4W1 244 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 OR10H5Q8NGA6 315 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 OR52I1Q8NGK6 324 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 OTOSQ8NHW6 89 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 HSD17B8Q92506 261 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF649Q9BS31 505 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 MED18Q9BUE0 208 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 ABHD6Q9BV23 337 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 TTTY10Q9BZA0 68 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 FKBP14Q9NWM8 211 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 EXOGQ9Y2C4 368 aaKnown RBP11.73□□□□□ -0.53
ERBB3-215ENST00000550828 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 CENPEQ02224 2701 aa11.73□□□□□ -0.53
ERBB3-215ENST00000550828 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 OR6C6A6NF89 314 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 TUBAL3A6NHL2 446 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 MAGEB4O15481 346 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-215ENST00000550828 SYNGR3O43761 229 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 CECR9P0C854 216 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 ALOX5APP20292 161 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 APEX1P27695 318 aaKnown RBP11.72□□□□□ -0.53
ERBB3-215ENST00000550828 HOXC12P31275 282 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 ZNF85Q03923 595 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 HGFACQ04756 655 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 SPOCK1Q08629 439 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 EIF2B1Q14232 305 aaKnown RBP11.72□□□□□ -0.53
ERBB3-215ENST00000550828 KRTAP27-1Q3LI81 207 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 SLC36A2Q495M3 483 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 TMEM154Q6P9G4 183 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
ERBB3-215ENST00000550828 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms