RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RAB40ALP0C0E4 278 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 ANOS1P23352 680 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 SLC35A1P78382 337 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 GPR176Q14439 515 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 PYHIN1Q6K0P9 492 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 TMEM81Q6P7N7 255 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 CATSPERDQ86XM0 798 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 PHYHIPQ92561 330 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
SRPRA-206ENST00000532259 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 RNF121Q9H920 327 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 ASH2LQ9UBL3 628 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 DHDHQ9UQ10 334 aa13.51□□□□□ -0.25
SRPRA-206ENST00000532259 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 CBR3O75828 277 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 ICAM2P13598 275 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 LAP3P28838 519 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
SRPRA-206ENST00000532259 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
SRPRA-206ENST00000532259 CHAF1BQ13112 559 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 RIN1Q13671 783 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 TGIF1Q15583 401 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 TRIP6Q15654 476 aaKnown RBP13.5□□□□□ -0.25
SRPRA-206ENST00000532259 UBE2NLQ5JXB2 153 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 WIPI1Q5MNZ9 446 aaPredicted RBP13.5□□□□□ -0.25
SRPRA-206ENST00000532259 ATP1A1-AS1Q5TC04 95 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 MZT2BQ6NZ67 158 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 SRXN1Q9BYN0 137 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 TAS2R4Q9NYW5 299 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 OR52A1Q9UKL2 312 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 LRRC3CA6NJW4 275 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 RER1O15258 196 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 SERPINA7P05543 415 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 FCER2P06734 321 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 DDOSTP39656 456 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 CYB561P49447 251 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 PRKXP51817 358 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 H3F3AP84243 136 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 PHYHD1Q5SRE7 291 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 THEM4Q5T1C6 240 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 PLXDC2Q6UX71 529 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 LINC00696Q6ZRV3 163 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 OR51D1Q8NGF3 324 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 OR51A2Q8NGJ7 313 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 ASB5Q8WWX0 329 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 SGCZQ96LD1 299 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 DMRTB1Q96MA1 342 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 PLA2G3Q9NZ20 509 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 LHFPL6Q9Y693 200 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 R4GMQ9 66 aa13.5□□□□□ -0.25
SRPRA-206ENST00000532259 LOC107986453A0A1B0GWG9 222 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 TERTO14746 1132 aaKnown RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 SGCAQ16586 387 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 H3F3CQ6NXT2 135 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 OR13C3Q8NGS6 347 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 YIPF5Q969M3 257 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 G6PC2Q9NQR9 355 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 CGGBP1Q9UFW8 167 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 NUFIP1Q9UHK0 495 aaKnown RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 CYB5R1Q9UHQ9 305 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 A0A087WZY1 265 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 SRSF10O75494 262 aaKnown RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 UBL3O95164 117 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 ITGA5P08648 1049 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 ITGA3P26006 1051 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 B3GALT5-AS1P59052 145 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 SPOCK1Q08629 439 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 PCK2Q16822 640 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 DND1Q8IYX4 353 aaKnown RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 SIGLEC12Q96PQ1 595 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 CDC6Q99741 560 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
SRPRA-206ENST00000532259 GDF2Q9UK05 429 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-206ENST00000532259 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 SPAARA0A1B0GVQ0 90 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 NPIPA2E9PIF3 369 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 NPIPA3F8WFD2 350 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 CD96P40200 585 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 NR4A2P43354 598 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 SELENOPP49908 381 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 EFNB2P52799 333 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 GALK2Q01415 458 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 SLC36A2Q495M3 483 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 DMRTC1Q5HYR2 192 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 SIAH3Q8IW03 269 aa13.48□□□□□ -0.25
SRPRA-206ENST00000532259 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms