RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GPA33Q99795 319 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 SYT4Q9H2B2 425 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 SAP30LQ9HAJ7 183 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 ELOVL3Q9HB03 270 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 CGGBP1Q9UFW8 167 aaPredicted RBP8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 CD300AQ9UGN4 299 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 TMEFF2Q9UIK5 374 aaPredicted RBP8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 V9GYQ6 96 aa8.9□□□□□ -0.98
HMGXB3-205ENST00000514469 RTTNQ86VV8 2226 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 PLSCR5A0PG75 271 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 IMPA2O14732 288 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ARPC2O15144 300 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 SGCEO43556 437 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC16A7O60669 478 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 CDC14BO60729 498 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 KHDRBS3O75525 346 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ABHD16AO95870 558 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 MSMBP08118 114 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 PCMT1P22061 227 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 HTR5AP47898 357 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ARHGDIAP52565 204 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 LSM6P62312 80 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 KRT72Q14CN4 511 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 TSTQ16762 297 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 KRTAP24-1Q3LI83 254 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 SAMD4BQ5PRF9 694 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 SMARCD3Q6STE5 483 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ARL9Q6T311 187 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 DPY19L2P2Q6ZN68 376 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 PTCHD4Q6ZW05 846 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 USP51Q70EK9 711 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 GLB1L2Q8IW92 636 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 NPEPL1Q8NDH3 523 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 OR52J3Q8NH60 311 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 FANK1Q8TC84 345 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 PYURFQ96I23 114 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 CYSLTR2Q9NS75 346 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 DECR2Q9NUI1 292 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ARL8BQ9NVJ2 186 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 TAGLN3Q9UI15 199 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 ATPIF1Q9UII2 106 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 AURKCQ9UQB9 309 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 CACNG2Q9Y698 323 aa8.89□□□□□ -0.99
HMGXB3-205ENST00000514469 OR6C6A6NF89 314 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 CLDN25C9JDP6 229 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 SOCS2O14508 198 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TPD52L2O43399 206 aaKnown RBP8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 SPRY3O43610 288 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 DEAF1O75398 565 aaPredicted RBP8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 GADD45GO95257 159 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 FABP3P05413 133 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 CD55P08174 381 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 GSTM3P21266 225 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TUBG1P23258 451 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 FPR3P25089 353 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 LIPAP38571 399 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 CDKN2AP42771 156 aaKnown RBP8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 RPS6KA3P51812 740 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 GYS2P54840 703 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 SMIM11AP58511 58 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 GNGT1P63211 74 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 SPIBQ01892 262 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 KCNMB1Q16558 191 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 HFEQ30201 348 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 SPATS1Q496A3 300 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ZMAT1Q5H9K5 638 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 AVPI1Q5T686 147 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 RINLQ6ZS11 566 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 PIGWQ7Z7B1 504 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ZER1Q7Z7L7 766 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 OR51F2Q8NH61 342 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TMEM186Q96B77 213 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ELMOD3Q96FG2 381 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 NSMCE2Q96MF7 247 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 DIRC2Q96SL1 478 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 NUAK2Q9H093 628 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 OR52D1Q9H346 318 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ZNF665Q9H7R5 613 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TUBG2Q9NRH3 451 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TBCCD1Q9NVR7 557 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 NDE1Q9NXR1 346 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 TREM2Q9NZC2 230 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ASH2LQ9UBL3 628 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 KLHL21Q9UJP4 597 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ZDHHC8Q9ULC8 765 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 ARL2BPQ9Y2Y0 163 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 WIPI2Q9Y4P8 454 aa8.88□□□□□ -0.99
HMGXB3-205ENST00000514469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■■■□ 22.7
HMGXB3-205ENST00000514469 IGLV1-36A0A0B4J1U3 117 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 J3QW42 95 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 DCTN6O00399 190 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 ARPC3O15145 178 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 DCTN3O75935 186 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 UBOX5O94941 541 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms