RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 FPR3P25089 353 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 ZFP36P26651 326 aaKnown RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 MAGEB1P43366 347 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 DAP3P51398 398 aaKnown RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 CTXN1P60606 82 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 PPP1R8Q12972 351 aaKnown RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 TAF11Q15544 211 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 PGBD2Q6P3X8 592 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 HDDC2Q7Z4H3 204 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 OR9Q2Q8NGE9 314 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 GNPDA2Q8TDQ7 276 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 ASB10Q8WXI3 467 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 DVL3Q92997 716 aaPredicted RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 SLC25A44Q96H78 314 aaPredicted RBP13.45□□□□□ -0.26
DDR1-250ENST00000503628 ZNF75AQ96N20 296 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 NDEL1Q9GZM8 345 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 TXNIPQ9H3M7 391 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 OPN4Q9UHM6 478 aa13.45□□□□□ -0.26
DDR1-250ENST00000503628 ZNF99A8MXY4 864 aaPredicted RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 M0R3G1 203 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 GNGT2O14610 69 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 FSHBP01225 129 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 IGHMP01871 453 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 ZNF26P17031 533 aaPredicted RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 PRTN3P24158 256 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 GSSP48637 474 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 CSNK1A1P48729 337 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 CCL8P80075 99 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 MICAQ29983 383 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 GSG1Q2KHT4 349 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 PHYHD1Q5SRE7 291 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 ARMC4Q5T2S8 1044 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 ZNF770Q6IQ21 691 aaPredicted RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 IGFN1Q86VF2 1251 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 SIGLECL1Q8N7X8 197 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 OR6N1Q8NGY5 312 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 ZNF566Q969W8 418 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 RAB39BQ96DA2 213 aa13.44□□□□□ -0.26
DDR1-250ENST00000503628 DUS3LQ96G46 650 aaKnown RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 STX18Q9P2W9 335 aaKnown RBP13.44□□□□□ -0.26
DDR1-250ENST00000503628 A0A1W2PPW3 197 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 CENPBD1B2RD01 187 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 NDUFB2O95178 105 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 IGHV2-5P01817 119 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 IGHG1P01857 330 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 PGA4P0DJD7 388 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 RPL4P36578 427 aaKnown RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 RPL27P61353 136 aaKnown RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 RPS23P62266 143 aaKnown RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 GALK2Q01415 458 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 TSPAN31Q12999 210 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 TOP3AQ13472 1001 aaPredicted RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 FANK1Q8TC84 345 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 TMEM54Q969K7 222 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 RAB3IPQ96QF0 476 aaPredicted RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 GPX7Q96SL4 187 aaPredicted RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 ULBP2Q9BZM5 246 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 ARMC1Q9NVT9 282 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 GLTPQ9NZD2 209 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 DNAJB9Q9UBS3 223 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 ZNF346Q9UL40 294 aaKnown RBP13.43□□□□□ -0.26
DDR1-250ENST00000503628 AP4S1Q9Y587 144 aa13.43□□□□□ -0.26
DDR1-250ENST00000503628 POM121CA8CG34 1229 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 TRMUO75648 421 aaKnown RBP13.42□□□□□ -0.26
DDR1-250ENST00000503628 TIPRLO75663 272 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 GASTP01350 101 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 CD14P08571 375 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 ACADSP16219 412 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 GATA3P23771 443 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 PTDSS1P48651 473 aaKnown RBP13.42□□□□□ -0.26
DDR1-250ENST00000503628 CLRN1P58418 232 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 ACTR3P61158 418 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 ERVK-25P63136 954 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 KPNB1Q14974 876 aaKnown RBP13.42□□□□□ -0.26
DDR1-250ENST00000503628 NKPD1Q17RQ9 610 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 FAM205BPQ63HN1 556 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 SMARCD3Q6STE5 483 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 AQP11Q8NBQ7 271 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 NOXO1Q8NFA2 376 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 OR10G2Q8NGC3 310 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 ZNF519Q8TB69 540 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDR1-250ENST00000503628 TSPAN32Q96QS1 320 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 MRPL13Q9BYD1 178 aaKnown RBP13.42□□□□□ -0.26
DDR1-250ENST00000503628 TAAR3PQ9P1P4 343 aa13.42□□□□□ -0.26
DDR1-250ENST00000503628 ARRDC5A6NEK1 342 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 DNAJC9-AS1A6NH13 148 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 C17orf100A8MU93 164 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 E2F6O75461 281 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 CLPTM1O96005 669 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 CRYBB2P43320 205 aa13.41□□□□□ -0.26
DDR1-250ENST00000503628 RAD52P43351 418 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms