RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 HSD17B12Q53GQ0 312 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 SPANXN2Q5MJ10 180 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 FDX2Q6P4F2 183 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 CROCCP3Q8IVE0 287 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 OR51A4Q8NGJ6 313 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 FNDC9Q8TBE3 224 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 PPP1R14AQ96A00 147 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF837Q96EG3 531 aaPredicted RBP15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 DERL3Q96Q80 235 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 ATF6BQ99941 703 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 ZDHHC11Q9H8X9 412 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 SPRR3Q9UBC9 169 aa15.74■□□□□ 0.11
CHRNA4-206ENST00000498043 SPENQ96T58 3664 aaKnown RBP15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 TRAV17A0A0B4J275 112 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 PIN1P1O15428 100 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 DHHO43323 396 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 ACTL6AO96019 429 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF24P17028 368 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF133P52736 654 aaPredicted RBP15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 Q499Y3 187 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 IDNKQ5T6J7 187 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 UNQ9370/PRO34162Q6UXP9 181 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 CCDC190Q86UF4 302 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 PARP16Q8N5Y8 322 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 TEX19Q8NA77 164 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF416Q9BWM5 594 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 NELFAQ9H3P2 528 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 COMMD3Q9UBI1 195 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 MCTS1Q9ULC4 181 aaKnown RBP15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 R4GMQ9 66 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 DNAJC13O75165 2243 aa15.73■□□□□ 0.11
CHRNA4-206ENST00000498043 DOK2O60496 412 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF254O75437 659 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 SRSF10O75494 262 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 RAB3BP20337 219 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 MSR1P21757 451 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 GUCA1AP43080 201 aaPredicted RBP15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 KCNMB1Q16558 191 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 DDI2Q5TDH0 399 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 SFXN4Q6P4A7 337 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 TPRA1Q86W33 373 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 CATSPERDQ86XM0 798 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 IL17RDQ8NFM7 739 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 SNIP1Q8TAD8 396 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 INTS12Q96CB8 462 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 MIXL1Q9H2W2 232 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 PALMDQ9NP74 551 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 BRD7Q9NPI1 651 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 B3GAT2Q9NPZ5 323 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 TRAV1-2A0A0B4J238 106 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 A0A0G2JK05 382 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 LOC110117498-PIK3R3F6TDL0 507 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 TAF4O00268 1085 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 RER1O15258 196 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 CCR9P51686 369 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF544Q6NX49 715 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 LRRC18Q8N456 261 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 TSEN15Q8WW01 171 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 NABP1Q96AH0 204 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 SLC30A2Q9BRI3 323 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 CRLF2Q9HC73 371 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 DAPK2Q9UIK4 370 aa15.72■□□□□ 0.11
CHRNA4-206ENST00000498043 TRBV5-5A0A0J9YX44 114 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 A0A1B0GVG6 124 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 TMEM269A0A1B0GVZ9 245 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF878C9JN71 531 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF84P51523 738 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 ZNF45Q02386 682 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 BCL2A1Q16548 175 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 SLC25A35Q3KQZ1 300 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 DEGS2Q6QHC5 323 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 FOXL2NBQ6ZUU3 175 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 GPR137CQ8N3F9 429 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 GPR148Q8TDV2 347 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 PRRG4Q9BZD6 226 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 CLEC4AQ9UMR7 237 aa15.71■□□□□ 0.11
CHRNA4-206ENST00000498043 GPR171O14626 319 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 CFL1P23528 166 aaKnown RBP15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 MAPK3P27361 379 aaPredicted RBP15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 CD40LGP29965 261 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 ETV6P41212 452 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 PPP5CP53041 499 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 TMEM106AQ96A25 262 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 WDFY2Q96P53 400 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 PAQR5Q9NXK6 330 aaPredicted RBP15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 CAMK2AQ9UQM7 478 aa15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 NOSIPQ9Y314 301 aaKnown RBP15.71■□□□□ 0.1
CHRNA4-206ENST00000498043 IGKV3D-15A0A087WSY6 115 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 HPGDSO60760 199 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 SLC2A2P11168 524 aaPredicted RBP15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 SRMP19623 302 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 ENDOGQ14249 297 aaKnown RBP15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 KLHL24Q6TFL4 600 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 LINGO2Q7L985 606 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 CHMP1BQ7LBR1 199 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 PHYHIPQ92561 330 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 G6PC2Q9NQR9 355 aa15.7■□□□□ 0.1
CHRNA4-206ENST00000498043 OR52A1Q9UKL2 312 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms