RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 EDA2RQ9HAV5 297 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 C12orf10Q9HB07 376 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 PISDQ9UG56 409 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 ST3GAL6Q9Y274 331 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 GAKO14976 1311 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 IGSF9BQ9UPX0 1349 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 PLA2R1Q13018 1463 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF705GA8MUZ8 300 aaPredicted RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 L7N2F9 121 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 UBXN8O00124 270 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 RRP8O43159 456 aaKnown RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 KLHL41O60662 606 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 EIF4EP06730 217 aaKnown RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 SLC25A11Q02978 314 aaKnown RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 PRSS8Q16651 343 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 XKR7Q5GH72 579 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 RAET1LQ5VY80 246 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 CEMP1Q6PRD7 247 aaPredicted RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 IGFL1Q6UW32 110 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 SLC16A14Q7RTX9 510 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 OR2A1Q8NGT9 310 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 OR10J6PQ8NGY7 276 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 PIFOQ8TCI5 191 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF606Q8WXB4 792 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 TMEM230Q96A57 120 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 FLYWCH2Q96CP2 140 aaKnown RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 LRRC58Q96CX6 371 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 RASD2Q96D21 266 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF681Q96N22 645 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 DOK1Q99704 481 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 HSD17B10Q99714 261 aaKnown RBP1.89□□□□□ -2.11
PSPC1-205ENST00000497722 TBL1YQ9BQ87 522 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 SULT4A1Q9BR01 284 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 NUP58Q9BVL2 599 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 NTN4Q9HB63 628 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 WDR62O43379 1518 aa1.89□□□□□ -2.11
PSPC1-205ENST00000497722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 GOLGA8OA6NCC3 632 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SPECC1L-ADORA2AF8WAN1 911 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 GOLGA8NF8WBI6 632 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 MRPS12O15235 138 aaKnown RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CHST10O43529 356 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 APCSP02743 223 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 FTH1P02794 183 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF688P0C7X2 276 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF14P17017 642 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 RAB3AP20336 220 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 AQP2P41181 271 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF138P52744 262 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CDH6P55285 790 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CACNG7P62955 275 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 TGM3Q08188 693 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 OR7A5Q15622 319 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 TCEAL5Q5H9L2 206 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SOHLH1Q5JUK2 328 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SPECC1LQ69YQ0 1117 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 TTC23LQ6PF05 361 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SASS6Q6UVJ0 657 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CMC1Q7Z7K0 106 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CDR2LQ86X02 465 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 LYPD1Q8N2G4 141 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 CBR4Q8N4T8 237 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SNX31Q8N9S9 440 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 OR4A4PQ8NGN8 299 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 OR8U1Q8NH10 309 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 LILRB4Q8NHJ6 448 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 FAM81AQ8TBF8 368 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 RNF139Q8WU17 664 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 C15orf40Q8WUR7 153 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 APH1BQ8WW43 257 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 TCEAL3Q969E4 200 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 RMI2Q96E14 147 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 NARS2Q96I59 477 aaKnown RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 ING2Q9H160 280 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 SAV1Q9H4B6 383 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 FBXO6Q9NRD1 293 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 OPN4Q9UHM6 478 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 LGALS13Q9UHV8 139 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 RFNGQ9Y644 331 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 PCM1Q15154 2024 aa1.88□□□□□ -2.11
PSPC1-205ENST00000497722 TET2Q6N021 2002 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-205ENST00000497722 GPATCH8Q9UKJ3 1502 aaKnown RBP1.87□□□□□ -2.11
PSPC1-205ENST00000497722 COLCA2A8K830 154 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 SYCE1LA8MT33 242 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 H7C0C1 242 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 SIRPB1O00241 398 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 RP2O75695 350 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 SNX4O95219 450 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 MPZL1O95297 269 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 IGHDP01880 384 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 ARG1P05089 322 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 CD3GP09693 182 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 LINC00869P0C866 280 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 CD37P11049 281 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 ERGP11308 486 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 IL1RNP18510 177 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 GTF2E2P29084 291 aaKnown RBP1.87□□□□□ -2.11
PSPC1-205ENST00000497722 ATP5OP48047 213 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 SLC11A1P49279 550 aa1.87□□□□□ -2.11
PSPC1-205ENST00000497722 RAB7AP51149 207 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms