RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 HIF1ANQ9NWT6 349 aa7.04□□□□□ -1.28
LSM2-213ENST00000491421 NDRG4Q9ULP0 352 aaKnown RBP7.04□□□□□ -1.28
LSM2-213ENST00000491421 TRBV4-1A0A0J9YWV2 114 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 UNC119BA6NIH7 251 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ZSCAN5BA6NJL1 495 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 CLDN25C9JDP6 229 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ATP8B1O43520 1251 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SGCEO43556 437 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SNX3O60493 162 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 DOK2O60496 412 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SLC16A7O60669 478 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 PTP4A3O75365 173 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 DIRAS1O95057 198 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ABHD16AO95870 558 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 NGFP01138 241 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 IGHV1-46P01743 117 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 COX5BP10606 129 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 CTLA4P16410 223 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ITGA2P17301 1181 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 GSTM3P21266 225 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SDHAP31040 664 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 LIPAP38571 399 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 OMPP47874 163 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 HTR5AP47898 357 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 LMO4P61968 165 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
LSM2-213ENST00000491421 AQP6Q13520 282 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 HFEQ30201 348 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ZMAT1Q5H9K5 638 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 TMEM255AQ5JRV8 349 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 FAM209AQ5JX71 171 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 LIPNQ5VXI9 398 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SHQ1Q6PI26 577 aaKnown RBP7.03□□□□□ -1.28
LSM2-213ENST00000491421 CPLX4Q7Z7G2 160 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ADCK1Q86TW2 530 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 GLB1L2Q8IW92 636 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 NPEPL1Q8NDH3 523 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 OR52J3Q8NH60 311 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 RASD2Q96D21 266 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ELMOD3Q96FG2 381 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 TIMD4Q96H15 378 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 C7orf34Q96L11 122 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 LRRC37BQ96QE4 947 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 C19orf24Q9BVV8 132 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 EGLN1Q9GZT9 426 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SYT4Q9H2B2 425 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 RERGLQ9H628 205 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ZNF665Q9H7R5 613 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 NRIP3Q9NQ35 241 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 CGGBP1Q9UFW8 167 aaPredicted RBP7.03□□□□□ -1.28
LSM2-213ENST00000491421 IL20RAQ9UHF4 553 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 MAGEL2Q9UJ55 1249 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 ZDHHC8Q9ULC8 765 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 AURKCQ9UQB9 309 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 SIGLEC7Q9Y286 467 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 GRIP1Q9Y3R0 1128 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 CACNG2Q9Y698 323 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 V9GYQ6 96 aa7.03□□□□□ -1.28
LSM2-213ENST00000491421 TRAV20A0A0B4J274 112 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 SOCS2O14508 198 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 TCF21O43680 179 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 TIMM8AO60220 97 aaPredicted RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 KHDRBS3O75525 346 aaKnown RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 ADH4P08319 380 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 ANPEPP15144 967 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 RPS6KA3P51812 740 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 SMIM11AP58511 58 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 SPIBQ01892 262 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 SEC23BQ15437 767 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 OTPQ5XKR4 325 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 ACSM5Q6NUN0 579 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 SMARCD3Q6STE5 483 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 THSD4Q6ZMP0 1018 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 DPY19L2P2Q6ZN68 376 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 ZER1Q7Z7L7 766 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 RFLNBQ8N5W9 214 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 FANK1Q8TC84 345 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 CCL17Q92583 94 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 RAB1CQ92928 201 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 MCUR1Q96AQ8 359 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 RAB39BQ96DA2 213 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 PYURFQ96I23 114 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 GPX7Q96SL4 187 aaPredicted RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 GORASP2Q9H8Y8 452 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 MSL2Q9HCI7 577 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 PLEK2Q9NYT0 353 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 VSX1Q9NZR4 365 aaPredicted RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 ASH2LQ9UBL3 628 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 COA3Q9Y2R0 106 aaPredicted RBP7.02□□□□□ -1.29
LSM2-213ENST00000491421 POLR1DQ9Y2S0 133 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 WIPI2Q9Y4P8 454 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 IER3IP1Q9Y5U9 82 aa7.02□□□□□ -1.29
LSM2-213ENST00000491421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.02□□□□□ -1.292e-6■□□□□ 11.1
LSM2-213ENST00000491421 MALRD1Q5VYJ5 2156 aa7.01□□□□□ -1.29
LSM2-213ENST00000491421 ISPDA4D126 451 aa7.01□□□□□ -1.29
LSM2-213ENST00000491421 IMPA2O14732 288 aa7.01□□□□□ -1.29
LSM2-213ENST00000491421 ARPC2O15144 300 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms