RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 IGHV4-34P06331 123 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 S100A9P06702 114 aaKnown RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 OR5H8P0DN80 308 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ZNF19P17023 458 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 RCC1P18754 421 aaPredicted RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 CSNK2A2P19784 350 aaPredicted RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 MAS1LP35410 378 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 NUDT1P36639 197 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 LONP1P36776 959 aaKnown RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 GPR1P46091 355 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 PSMD4P55036 377 aaKnown RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 SEMG2Q02383 582 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 PSG7Q13046 419 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 TMED1Q13445 227 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ZNF79Q15937 498 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 HNRNPA1L2Q32P51 320 aaKnown RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 TTLL9Q3SXZ7 439 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 UBE2UQ5VVX9 321 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 H2AFVQ71UI9 128 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 STRADAQ7RTN6 431 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 OAFQ86UD1 273 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 CBLN2Q8IUK8 224 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 MYOCDQ8IZQ8 938 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 STPG2Q8N412 459 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 FAM71E2Q8N5Q1 922 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 OR51F2Q8NH61 342 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ACTRT1Q8TDG2 376 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 PIH1D2Q8WWB5 315 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 IL22RA2Q969J5 263 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 APH1AQ96BI3 265 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 PDFQ9HBH1 243 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 DYRK4Q9NR20 520 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ABCB10Q9NRK6 738 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ZNF226Q9NYT6 803 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ZNF629Q9UEG4 869 aaPredicted RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 PCYOX1Q9UHG3 505 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 ZNF225Q9UK10 706 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 DDX19BQ9UMR2 479 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 KCNE3Q9Y6H6 103 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 NFASCO94856 1347 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 IGLV1-36A0A0B4J1U3 117 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 NCBP2LA6PVI3 153 aaKnown RBP2.93□□□□□ -1.94
XRN1-213ENST00000489241 PES1O00541 588 aaKnown RBP2.93□□□□□ -1.94
XRN1-213ENST00000489241 RAD51CO43502 376 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 SUPT3HO75486 399 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 IGLV2-23P01705 113 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 TPM1P09493 284 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 GGT1P19440 569 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 CFHR2P36980 270 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 NUP62P37198 522 aaPredicted RBP2.93□□□□□ -1.94
XRN1-213ENST00000489241 CRISP3P54108 245 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 LCN2P80188 198 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 SLC7A9P82251 487 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 ZNF33AQ06730 810 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 MLIPQ5VWP3 458 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 ULK3Q6PHR2 472 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 NPSR1Q6W5P4 371 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 C12orf54Q6X4T0 127 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 ZNF493Q6ZR52 646 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 OR4A15Q8NGL6 344 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 OR6X1Q8NH79 312 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 LKAAEAR1Q8TD35 194 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 MICU1Q9BPX6 476 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 SIKE1Q9BRV8 207 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 NAA50Q9GZZ1 169 aaKnown RBP2.93□□□□□ -1.94
XRN1-213ENST00000489241 DEFB129Q9H1M3 183 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 XKR8Q9H6D3 395 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 MRM3Q9HC36 420 aaKnown RBP2.93□□□□□ -1.94
XRN1-213ENST00000489241 DEC1Q9P2X7 70 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 ADGRA3Q8IWK6 1321 aa2.93□□□□□ -1.94
XRN1-213ENST00000489241 TRAV6A0A075B6T7 132 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 PLAC8L1A1L4L8 177 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 PLPP1O14494 284 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 XRCC2O43543 280 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 CHMP2AO43633 222 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 KDELR3O43731 214 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 HSBP1O75506 76 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 RAB3DO95716 219 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 DCNP07585 359 aaKnown RBP2.92□□□□□ -1.94
XRN1-213ENST00000489241 ATF6P18850 670 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 RAB4AP20338 218 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 PMCHP20382 165 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 PTNP21246 168 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 CCNE1P24864 410 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 F2RP25116 425 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 NMUP48645 174 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 SERPINB8P50452 374 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ATP6V0D1P61421 351 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 XIAPP98170 497 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 SMARCB1Q12824 385 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 CDH17Q12864 832 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 PRPSAP1Q14558 356 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 TSC22D1Q15714 1073 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 FAM83EQ2M2I3 478 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 RSPO1Q2MKA7 263 aaPredicted RBP2.92□□□□□ -1.94
XRN1-213ENST00000489241 PTPN20Q4JDL3 420 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 TPTE2P1Q5T6R2 138 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ADNP2Q6IQ32 1131 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 LYPD2Q6UXB3 125 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ASCL4Q6XD76 172 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms