RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KCNMB1Q16558 191 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 HSD17B12Q53GQ0 312 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 UNQ9370/PRO34162Q6UXP9 181 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 TPRA1Q86W33 373 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 OR10S1Q8NGN2 331 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 SNIP1Q8TAD8 396 aaKnown RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 MCTS1Q9ULC4 181 aaKnown RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 NCOA6Q14686 2063 aaPredicted RBP16.03■□□□□ 0.16
SMC4-211ENST00000469858 OCM2P0CE71 109 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ZNF24P17028 368 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 MSR1P21757 451 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 TNFSF8P32971 234 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 SOX2P48431 317 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 Q499Y3 187 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 SPANXN2Q5MJ10 180 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ZNF544Q6NX49 715 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 DEGS2Q6QHC5 323 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.03■□□□□ 0.16
SMC4-211ENST00000469858 SYT9Q86SS6 491 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 OR10AC1Q8NH08 325 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 PPP1R14AQ96A00 147 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ZNF837Q96EG3 531 aaPredicted RBP16.03■□□□□ 0.16
SMC4-211ENST00000469858 DERL3Q96Q80 235 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ALKBH3Q96Q83 286 aaPredicted RBP16.03■□□□□ 0.16
SMC4-211ENST00000469858 ATF6BQ99941 703 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 PRRG4Q9BZD6 226 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 NELFAQ9H3P2 528 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 ABCB9Q9NP78 766 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 PAQR5Q9NXK6 330 aaPredicted RBP16.03■□□□□ 0.16
SMC4-211ENST00000469858 SPRR3Q9UBC9 169 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 EMC9Q9Y3B6 208 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 R4GMQ9 66 aa16.03■□□□□ 0.16
SMC4-211ENST00000469858 TRAV1-2A0A0B4J238 106 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 LOC110117498-PIK3R3F6TDL0 507 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 TAF4O00268 1085 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 PIN1P1O15428 100 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 ZNF84P51523 738 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 CCR9P51686 369 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 CCDC190Q86UF4 302 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 CATSPERDQ86XM0 798 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 PARP16Q8N5Y8 322 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 OR51A4Q8NGJ6 313 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 PHYHIPQ92561 330 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 ZNF416Q9BWM5 594 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 PALMDQ9NP74 551 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 COMMD3Q9UBI1 195 aa16.02■□□□□ 0.16
SMC4-211ENST00000469858 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.15
SMC4-211ENST00000469858 RER1O15258 196 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 SRSF10O75494 262 aaKnown RBP16.02■□□□□ 0.15
SMC4-211ENST00000469858 RAB3BP20337 219 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 ZNF45Q02386 682 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 IDNKQ5T6J7 187 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 DDI2Q5TDH0 399 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 FOXL2NBQ6ZUU3 175 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 SNX29P2Q8IUI4 249 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 GPR137CQ8N3F9 429 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 IL17RDQ8NFM7 739 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 GPR148Q8TDV2 347 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 NABP1Q96AH0 204 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 SLC30A2Q9BRI3 323 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 SLC25A18Q9H1K4 315 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 CRLF2Q9HC73 371 aa16.02■□□□□ 0.15
SMC4-211ENST00000469858 FRYQ5TBA9 3013 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 TRBV5-5A0A0J9YX44 114 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 TMEM269A0A1B0GVZ9 245 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 ZNF878C9JN71 531 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 DLL1O00548 723 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 CFL1P23528 166 aaKnown RBP16.01■□□□□ 0.15
SMC4-211ENST00000469858 MAPK3P27361 379 aaPredicted RBP16.01■□□□□ 0.15
SMC4-211ENST00000469858 ETV6P41212 452 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 PPP5CP53041 499 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 LSM6P62312 80 aaKnown RBP16.01■□□□□ 0.15
SMC4-211ENST00000469858 SFXN4Q6P4A7 337 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 LRRC18Q8N456 261 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 MIXL1Q9H2W2 232 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 BRD7Q9NPI1 651 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 B3GAT2Q9NPZ5 323 aa16.01■□□□□ 0.15
SMC4-211ENST00000469858 NOSIPQ9Y314 301 aaKnown RBP16.01■□□□□ 0.15
SMC4-211ENST00000469858 IGKV3D-15A0A087WSY6 115 aa16■□□□□ 0.15
SMC4-211ENST00000469858 A0A0G2JK05 382 aa16■□□□□ 0.15
SMC4-211ENST00000469858 GPR171O14626 319 aa16■□□□□ 0.15
SMC4-211ENST00000469858 SRMP19623 302 aa16■□□□□ 0.15
SMC4-211ENST00000469858 SDHBP21912 280 aa16■□□□□ 0.15
SMC4-211ENST00000469858 CD40LGP29965 261 aa16■□□□□ 0.15
SMC4-211ENST00000469858 KLHL24Q6TFL4 600 aa16■□□□□ 0.15
SMC4-211ENST00000469858 ZADH2Q8N4Q0 377 aa16■□□□□ 0.15
SMC4-211ENST00000469858 TSEN15Q8WW01 171 aaKnown RBP16■□□□□ 0.15
SMC4-211ENST00000469858 WDFY2Q96P53 400 aa16■□□□□ 0.15
SMC4-211ENST00000469858 OCEL1Q9H607 264 aa16■□□□□ 0.15
SMC4-211ENST00000469858 DAPK2Q9UIK4 370 aa16■□□□□ 0.15
SMC4-211ENST00000469858 OR52A1Q9UKL2 312 aa16■□□□□ 0.15
SMC4-211ENST00000469858 CLEC4AQ9UMR7 237 aa16■□□□□ 0.15
SMC4-211ENST00000469858 CAMK2AQ9UQM7 478 aa16■□□□□ 0.15
SMC4-211ENST00000469858 DOK2O60496 412 aa16■□□□□ 0.15
SMC4-211ENST00000469858 ENDOGQ14249 297 aaKnown RBP16■□□□□ 0.15
SMC4-211ENST00000469858 TAF13Q15543 124 aa16■□□□□ 0.15
SMC4-211ENST00000469858 SLC25A35Q3KQZ1 300 aa16■□□□□ 0.15
SMC4-211ENST00000469858 TMEM45BQ96B21 275 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms