RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PTPRQQ9UMZ3 2332 aa16.77■□□□□ 0.27
CCDC78-206ENST00000463539 CLPXO76031 633 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 ZFPL1O95159 310 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 H2BFMP0C1H6 154 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 NPR2P20594 1047 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 OPRL1P41146 370 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 FAM180AQ6UWF9 173 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 LINGO2Q7L985 606 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-206ENST00000463539 OR5M9Q8NGP3 310 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 TRIB1Q96RU8 372 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 LINC00470Q9BZP3 86 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 GPR35Q9HC97 309 aa16.76■□□□□ 0.27
CCDC78-206ENST00000463539 CCDC59Q9P031 241 aaKnown RBP16.76■□□□□ 0.27
CCDC78-206ENST00000463539 IGHV3-9P01782 118 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 FAM87AP0C7U9 286 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 PLA2G5P39877 138 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ROR2Q01974 943 aaKnown RBP16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF544Q6NX49 715 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 FDX2Q6P4F2 183 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 OR13C5Q8NGS8 318 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 OR5AK2Q8NH90 309 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 C4orf45Q96LM5 186 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 GPR137Q96N19 417 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 SLIRPQ9GZT3 109 aaKnown RBP16.75■□□□□ 0.27
CCDC78-206ENST00000463539 SIAEQ9HAT2 523 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 TMEM38BQ9NVV0 291 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF281Q9Y2X9 895 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 BOD1L1Q8NFC6 3051 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 RER1O15258 196 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 SC5DO75845 299 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 CDRT1O95170 752 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 PAX7P23759 505 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 AGTR1P30556 359 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 RPS19P39019 145 aaKnown RBP16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ENDOGQ14249 297 aaKnown RBP16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ACSM3Q53FZ2 586 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 YIF1BQ5BJH7 314 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 FAM27BQ5VT28 67 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 UNQ6494/PRO21346Q6UXR6 183 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 CEACAM19Q7Z692 300 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF100Q8IYN0 542 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 LRRC18Q8N456 261 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 OR10S1Q8NGN2 331 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 GMPPAQ96IJ6 420 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-206ENST00000463539 SLC7A10Q9NS82 523 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 FBXL3Q9UKT7 428 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 GTF2A1LQ9UNN4 478 aa16.75■□□□□ 0.27
CCDC78-206ENST00000463539 SPENQ96T58 3664 aaKnown RBP16.74■□□□□ 0.27
CCDC78-206ENST00000463539 CHD8Q9HCK8 2581 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 TMEM212A6NML5 194 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF878C9JN71 531 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 TAF4O00268 1085 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 DVL2O14641 736 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 IL1AP01583 271 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 B4GALT1P15291 398 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 SDC2P34741 201 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 SOX6P35712 828 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 MXD1Q05195 221 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 WDR38Q5JTN6 314 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 RHOUQ7L0Q8 258 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 PRSS35Q8N3Z0 413 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 FOXB1Q99853 325 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 COMMD4Q9H0A8 199 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 GLRX2Q9NS18 164 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 SNTG1Q9NSN8 517 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 R4GMQ9 66 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 PMF1-BGLAPU3KQ54 211 aa16.74■□□□□ 0.27
CCDC78-206ENST00000463539 OR4C45A6NMZ5 311 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF587BE7ETH6 402 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 PEX19P40855 299 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 CCR9P51686 369 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 RPS11P62280 158 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 MFGE8Q08431 387 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF829Q3KNS6 432 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 PAMR1Q6UXH9 720 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 NUFIP2Q7Z417 695 aaKnown RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF676Q8N7Q3 588 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 GJC3Q8NFK1 279 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZCCHC14Q8WYQ9 949 aaKnown RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 MED18Q9BUE0 208 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 EMC9Q9Y3B6 208 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 AHRRA9YTQ3 701 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 SS18L1O75177 396 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 PNPP00491 289 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 CALRP27797 417 aaKnown RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 KIR3DL2P43630 455 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 TAF13Q15543 124 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZNF404Q494X3 552 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ACSF3Q4G176 576 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 ZMAT1Q5H9K5 638 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 KLHL24Q6TFL4 600 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 MCFD2Q8NI22 146 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 TBC1D15Q8TC07 691 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 RGP1Q92546 391 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-206ENST00000463539 OR14A2Q96R54 314 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 UPB1Q9UBR1 384 aa16.73■□□□□ 0.27
CCDC78-206ENST00000463539 TMEM269A0A1B0GVZ9 245 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms