RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KLHL15Q96M94 604 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 MOGAT1Q96PD6 335 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 CDC6Q99741 560 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 REG4Q9BYZ8 158 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 MYOTQ9UBF9 498 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 SDK2Q58EX2 2172 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 TRAV8-7A0A075B6U6 113 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 hCG_1807616A0A1W2PRN6 198 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 BLOC1S5-TXNDC5H3BN57 136 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 L7N2F9 121 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 PSMD9O00233 223 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 EIF4E2O60573 245 aaKnown RBP11.16□□□□□ -0.62
COL4A6-204ENST00000461897 RBBP9O75884 186 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 ZFAND5O76080 213 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 WISP1O95388 367 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 HIST1H2ABP04908 130 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 CELA2AP08217 269 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 JMJD7P0C870 316 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 VSIG10L2P0DP72 767 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 CD37P11049 281 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 ITPKBP27987 946 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 GRPRP30550 384 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 SLC6A8P48029 635 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 MESTQ5EB52 335 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 HIST3H2AQ7L7L0 130 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 TMPRSS12Q86WS5 348 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 OR5L2Q8NGL0 311 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 HIST1H2ACQ93077 130 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 C4orf45Q96LM5 186 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 TAAR9Q96RI9 348 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 ZPBPQ9BS86 351 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 DDA1Q9BW61 102 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 COMMD4Q9H0A8 199 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF700Q9H0M5 742 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 OPN4Q9UHM6 478 aa11.16□□□□□ -0.62
COL4A6-204ENST00000461897 MFSD2BA6NFX1 497 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 GGT3PA6NGU5 568 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ANXA2P2A6NMY6 339 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 FAM171A2A8MVW0 826 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 C9orf172C9J069 976 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 PYCARD-AS1I3L0S3 204 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 DCTN6O00399 190 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 OR2J2O76002 312 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 RPP14O95059 124 aaKnown RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ANXA2P07355 339 aaKnown RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ZP3P21754 424 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 SEC61A1P61619 476 aaKnown RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 TAGLNQ01995 201 aaKnown RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 TCF15Q12870 199 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 FAM166AQ6J272 317 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 DHRS13Q6UX07 377 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF563Q8TA94 476 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 IMMP1LQ96LU5 166 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 CHIAQ9BZP6 476 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 SPRY4Q9C004 299 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ADAM19Q9H013 955 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 ALX4Q9H161 411 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-204ENST00000461897 FKRPQ9H9S5 495 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 LAMP5Q9UJQ1 280 aa11.15□□□□□ -0.62
COL4A6-204ENST00000461897 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 UBE2QL1A1L167 161 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 SUSD5O60279 629 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 CTAG2O75638 210 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 DKK1O94907 266 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 AKR7A3O95154 331 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 MT-CO3P00414 261 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 ACSM4P0C7M7 580 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 TMIGD3P0DMS9 266 aaPredicted RBP11.15□□□□□ -0.63
COL4A6-204ENST00000461897 PTHLHP12272 177 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 NAGAP17050 411 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 TACR3P29371 465 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 FOLR3P41439 243 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 SOX2P48431 317 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 RPS18P62269 152 aaKnown RBP11.15□□□□□ -0.63
COL4A6-204ENST00000461897 OR5M10Q6IEU7 315 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 RGS7BPQ6MZT1 257 aaPredicted RBP11.15□□□□□ -0.63
COL4A6-204ENST00000461897 C6orf15Q6UXA7 325 aaPredicted RBP11.15□□□□□ -0.63
COL4A6-204ENST00000461897 SLC51BQ86UW2 128 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 PRSS35Q8N3Z0 413 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 OR4C16Q8NGL9 310 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 TMEM106AQ96A25 262 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 CDCP1Q9H5V8 836 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 GRHPRQ9UBQ7 328 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.63
COL4A6-204ENST00000461897 PADI1Q9ULC6 663 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 PCDHGA1Q9Y5H4 931 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 KCNMB2Q9Y691 235 aa11.15□□□□□ -0.63
COL4A6-204ENST00000461897 CPAMD8Q8IZJ3 1885 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 SULT1C2O00338 296 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 RENP00797 406 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 NMBP08949 121 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 FBXO45P0C2W1 286 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 PGCP20142 388 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 S100A11P31949 105 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms