RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 OR2T29Q8NH02 315 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 LRR1Q96L50 414 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 NEDD4LQ96PU5 975 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 FYTTD1Q96QD9 318 aaKnown RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 MED18Q9BUE0 208 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SLC22A4Q9H015 551 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SLC7A10Q9NS82 523 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZNF226Q9NYT6 803 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZNF726A6NNF4 738 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 TNFRSF11BO00300 401 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 FAM20BO75063 409 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 SERPINI2O75830 405 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 PAHP00439 452 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 CST1P01037 141 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 IFNGR1P15260 489 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 IGHV1-2P23083 117 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 GADD45AP24522 165 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 MPGP29372 298 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 AQP2P41181 271 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 GPR4P46093 362 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 OMPP47874 163 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 PRPS1P60891 318 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 MRPL28Q13084 256 aaKnown RBP9.75□□□□□ -0.85
APTX-209ENST00000460940 DAZAP2Q15038 168 aaPredicted RBP9.75□□□□□ -0.85
APTX-209ENST00000460940 ALG10Q5BKT4 473 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 ZBTB37Q5TC79 503 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 OR7E24Q6IFN5 339 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 GPR137CQ8N3F9 429 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 ZNF433Q8N7K0 673 aaPredicted RBP9.75□□□□□ -0.85
APTX-209ENST00000460940 OR6X1Q8NH79 312 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
APTX-209ENST00000460940 REEP1Q9H902 201 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 B3GAT2Q9NPZ5 323 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 MED29Q9NX70 200 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 NUFIP1Q9UHK0 495 aaKnown RBP9.75□□□□□ -0.85
APTX-209ENST00000460940 FREM1Q5H8C1 2179 aa9.75□□□□□ -0.85
APTX-209ENST00000460940 CCDC182A6NF36 153 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 MCIDASD6RGH6 385 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 RPL36A-HNRNPH2H7BZ11 118 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 TOR1AO14656 332 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 CASKO14936 926 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 KLF4O43474 513 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 OR10H3O60404 316 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 LYZL6O75951 148 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 IGHMP01871 453 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 LCKP06239 509 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 ITGA5P08648 1049 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 CD53P19397 219 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 FPR3P25089 353 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 DNAJA1P31689 397 aaKnown RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 LIPAP38571 399 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 RIN1Q13671 783 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 STK11Q15831 433 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 C20orf196Q8IYI0 205 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 OR8H2Q8N162 312 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 C17orf78Q8N4C9 275 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 ZNF540Q8NDQ6 660 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 OR4C15Q8NGM1 316 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 OR13C2Q8NGS9 318 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 HSD17B8Q92506 261 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 WFIKKN1Q96NZ8 548 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 WDFY2Q96P53 400 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 ALKBH3Q96Q83 286 aaPredicted RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 TRAV27A0A087WT01 109 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 CDC42EP2O14613 210 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 MYL9P24844 172 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 BIDP55957 195 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 SNTB1Q13884 538 aaKnown RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 MAD2L1BPQ15013 274 aaPredicted RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 TIMM23BQ5SRD1 257 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 ZNF295-AS1Q8N0V1 137 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 OR51A7Q8NH64 312 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 SLC25A44Q96H78 314 aaPredicted RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 BOD1Q96IK1 185 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 PPA2Q9H2U2 334 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 TXNIPQ9H3M7 391 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 SCPEP1Q9HB40 452 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 MCCC2Q9HCC0 563 aa9.74□□□□□ -0.85
APTX-209ENST00000460940 SAMHD1Q9Y3Z3 626 aaKnown RBP9.74□□□□□ -0.85
APTX-209ENST00000460940 CIB4A0PJX0 185 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 UNC119BA6NIH7 251 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 OR5H1A6NKK0 313 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 A6NNC1 897 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 GNGT2O14610 69 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 UPK3AO75631 287 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 SLC22A5O76082 557 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 CCNB2O95067 398 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 NDUFB2O95178 105 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 IGHG1P01857 330 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 F13BP05160 661 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 NR2C1P13056 603 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 CRYGSP22914 178 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms