RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 NDUFB2O95178 105 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CD55P08174 381 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SRP14P37108 136 aaKnown RBP13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 MVKQ03426 396 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 PSG7Q13046 419 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GLYATQ6IB77 296 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 C1orf229Q6ZS94 237 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RRM2BQ7LG56 351 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RASD2Q96D21 266 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ELMOD3Q96FG2 381 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 LRRC37BQ96QE4 947 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GPA33Q99795 319 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 POFUT1Q9H488 388 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ZNF665Q9H7R5 613 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GORASP2Q9H8Y8 452 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ELOVL3Q9HB03 270 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 G6PC2Q9NQR9 355 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TRAV20A0A0B4J274 112 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 PLSCR5A0PG75 271 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SPRY3O43610 288 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TCF21O43680 179 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SNX3O60493 162 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TXNDC12O95881 172 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 IGHV2-5P01817 119 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SEMG1P04279 462 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 LIPAP38571 399 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SCRN3Q0VDG4 424 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 HFEQ30201 348 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ACSM5Q6NUN0 579 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 VASH1Q7L8A9 365 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RSRC1Q96IZ7 334 aaKnown RBP13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SYT4Q9H2B2 425 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 IL20RAQ9UHF4 553 aa13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SAMD4AQ9UPU9 718 aaKnown RBP13.44□□□□□ -0.26
SPTLC1P1-201ENST00000447199 OR6C6A6NF89 314 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TPD52L2O43399 206 aaKnown RBP13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ATP8B1O43520 1251 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SGCEO43556 437 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 DOK2O60496 412 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 DIRAS1O95057 198 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 MPZL1O95297 269 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ABHD16AO95870 558 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TUBG1P23258 451 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ARHGDIAP52565 204 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 LSM6P62312 80 aaKnown RBP13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CDK5R2Q13319 367 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 AQP6Q13520 282 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 LIPNQ5VXI9 398 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 OTPQ5XKR4 325 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 DPY19L2P2Q6ZN68 376 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ADCK1Q86TW2 530 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GLB1L2Q8IW92 636 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CCL17Q92583 94 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 DIRC2Q96SL1 478 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 NDEL1Q9GZM8 345 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 NUAK2Q9H093 628 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 TUBG2Q9NRH3 451 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ZDHHC8Q9ULC8 765 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 COA3Q9Y2R0 106 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 GRIP1Q9Y3R0 1128 aa13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
SPTLC1P1-201ENST00000447199 PLPP2O43688 288 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SLC16A7O60669 478 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 KHDRBS3O75525 346 aaKnown RBP13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 PNPP00491 289 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 AVPP01185 164 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 HSD17B1P14061 328 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ANPEPP15144 967 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ITGA2P17301 1181 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 KITLGP21583 273 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CDKN2AP42771 156 aaKnown RBP13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 HTR5AP47898 357 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 HNRNPA0Q13151 305 aaKnown RBP13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 KCNMB1Q16558 191 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CCDC92Q53HC0 331 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 MTX3Q5HYI7 312 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ARL9Q6T311 187 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 Q6ZR03 302 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ZER1Q7Z7L7 766 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 NPEPL1Q8NDH3 523 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 SLC7A6Q92536 515 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RAB1CQ92928 201 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 RAB39BQ96DA2 213 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 EGLN1Q9GZT9 426 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 METTL17Q9H7H0 456 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ADA2Q9NZK5 511 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ASH2LQ9UBL3 628 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 CD300AQ9UGN4 299 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 ATPIF1Q9UII2 106 aa13.42□□□□□ -0.26
SPTLC1P1-201ENST00000447199 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms