RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SRMP19623 302 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PLA2G7Q13093 441 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SELPLGQ14242 412 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 C16orf52Q8NHV5 167 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SECTM1Q8WVN6 248 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 OPALINQ96PE5 141 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 A3GALT2U3KPV4 340 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 RPS10-NUDT3A0A1W2PQS6 291 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PAPLNO95428 1278 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 OPN1LWP04000 364 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 FBXO45P0C2W1 286 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 HMGCLL1Q8TB92 370 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 GHSRQ92847 366 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 HEYLQ9NQ87 328 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 CLDN15P56746 228 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 KCNAB1Q14722 419 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NHLRC1Q6VVB1 395 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SUMF2Q8NBJ7 301 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 TP53I13Q8NBR0 393 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 GGHQ92820 318 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 MFFQ9GZY8 342 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 HRH3Q9Y5N1 445 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 TRGV10A0A0A0MS01 117 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF816-ZNF321PA0A0X1KG74 233 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PMS2P2O95744 297 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ELK1P19419 428 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NFYBP25208 207 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 GPR12P47775 334 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 MS4A2Q01362 244 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 MPPED2Q15777 294 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 IGFBP7Q16270 282 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF529Q6P280 563 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 RFLNAQ6ZTI6 216 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 LFNGQ8NES3 379 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PLCXD1Q9NUJ7 323 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 EXO1Q9UQ84 846 aaKnown RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 CRYM-AS1A6NIL9 109 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 GJB3O75712 270 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 GABRB3P28472 473 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 TATDN3Q17R31 274 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 MOB1BQ7L9L4 216 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OR2T35Q8NGX2 323 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SLAMF6Q96DU3 332 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 H0Y8X5 98 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CLEC3BP05452 202 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 FUT6P51993 359 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF626Q68DY1 528 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 B3GNT8Q7Z7M8 397 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 ACBD4Q8NC06 268 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 FAM3DQ96BQ1 224 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CRLF2Q9HC73 371 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 P4HTMQ9NXG6 502 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 COL11A1P12107 1806 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 PRSS37A4D1T9 235 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OPRM1P35372 400 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CEACAM3P40198 252 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 NUBP1P53384 320 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 HOXC5Q00444 222 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 PRTGQ2VWP7 1150 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OR7G2Q8NG99 324 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OCIAD1Q9NX40 245 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 MBP02144 154 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 GLYR1Q49A26 553 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SMRP1Q8NCR6 262 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 DEFB124Q8NES8 71 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OR5D13Q8NGL4 314 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 OR2T11Q8NH01 316 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CLDN1O95832 211 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SRD5A2P31213 254 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 BSGP35613 385 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 PGGT1BP53609 377 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 UBE2G2P60604 165 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 DHODHQ02127 395 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 TSEN54Q7Z6J9 526 aaKnown RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SLC25A19Q9HC21 320 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 GFOD1Q9NXC2 390 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 NPAP1Q9NZP6 1156 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 C5orf49A4QMS7 147 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 G3V3Y1 287 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 GALR2O43603 387 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 NDUFB3O43676 98 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CLN5O75503 358 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 NUBPLQ8TB37 319 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM255BQ8WV15 326 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 COA3Q9Y2R0 106 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SBF2Q86WG5 1849 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 BHLHE40O14503 412 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CRYZL1O95825 349 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 CD1EP15812 388 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF85Q03923 595 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 HFEQ30201 348 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 PRSS42Q7Z5A4 293 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 ABI3BPQ7Z7G0 1075 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms