RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 GORASP2Q9H8Y8 452 aa17.26■□□□□ 0.35
NCKIPSD-206ENST00000439518 LPAR2Q9HBW0 351 aa17.26■□□□□ 0.35
NCKIPSD-206ENST00000439518 CYSLTR2Q9NS75 346 aa17.26■□□□□ 0.35
NCKIPSD-206ENST00000439518 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
NCKIPSD-206ENST00000439518 NDRG4Q9ULP0 352 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-206ENST00000439518 PLSCR5A0PG75 271 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 TPD52L2O43399 206 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 SPRY3O43610 288 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 DIRAS1O95057 198 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 LIPAP38571 399 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 ARHGDIAP52565 204 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 SCRN3Q0VDG4 424 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 AVPI1Q5T686 147 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 ARL9Q6T311 187 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 RINLQ6ZS11 566 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 RFLNBQ8N5W9 214 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 OR51F2Q8NH61 342 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 RSRC1Q96IZ7 334 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 GPA33Q99795 319 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 C19orf24Q9BVV8 132 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 TBCCD1Q9NVR7 557 aa17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 VSX1Q9NZR4 365 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 CGGBP1Q9UFW8 167 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-206ENST00000439518 CLDN25C9JDP6 229 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 IMPA2O14732 288 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 SGCEO43556 437 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 TXNDC12O95881 172 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 SEMG1P04279 462 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 HFEQ30201 348 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 DPY19L2P2Q6ZN68 376 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 VASH1Q7L8A9 365 aaPredicted RBP17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 ADCK1Q86TW2 530 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 ELMOD3Q96FG2 381 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 SYT4Q9H2B2 425 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 ZNF665Q9H7R5 613 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 IL20RAQ9UHF4 553 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 ZDHHC8Q9ULC8 765 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 WIPI2Q9Y4P8 454 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 IER3IP1Q9Y5U9 82 aa17.24■□□□□ 0.35
NCKIPSD-206ENST00000439518 TRAV20A0A0B4J274 112 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 UNC119BA6NIH7 251 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 DOK2O60496 412 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 SLC16A7O60669 478 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 DEAF1O75398 565 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 GMNNO75496 209 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 KHDRBS3O75525 346 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 UBOX5O94941 541 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 ABHD16AO95870 558 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 CD55P08174 381 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 HSD17B1P14061 328 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 TUBG1P23258 451 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 HTR5AP47898 357 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 LSM6P62312 80 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 PSG7Q13046 419 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 AQP6Q13520 282 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 ACSM5Q6NUN0 579 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 PTCHD4Q6ZW05 846 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 GLB1L2Q8IW92 636 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 OR52J3Q8NH60 311 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 PYURFQ96I23 114 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 DIRC2Q96SL1 478 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 TUBG2Q9NRH3 451 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 COA3Q9Y2R0 106 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 GRIP1Q9Y3R0 1128 aa17.23■□□□□ 0.35
NCKIPSD-206ENST00000439518 SOCS2O14508 198 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 MPZL1O95297 269 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 ANPEPP15144 967 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 ITGA2P17301 1181 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 CDKN2AP42771 156 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 CDK5R2Q13319 367 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 KRT72Q14CN4 511 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 KCNMB1Q16558 191 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 LIPNQ5VXI9 398 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 OTPQ5XKR4 325 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 NPEPL1Q8NDH3 523 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 CCL17Q92583 94 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 RAB1CQ92928 201 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 EGLN1Q9GZT9 426 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 NUAK2Q9H093 628 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 POFUT1Q9H488 388 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 RERGLQ9H628 205 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 MSL2Q9HCI7 577 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 KRCC1Q9NPI7 259 aaPredicted RBP17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 ASH2LQ9UBL3 628 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 CD300AQ9UGN4 299 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 AURKCQ9UQB9 309 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 STARD10Q9Y365 291 aa17.22■□□□□ 0.35
NCKIPSD-206ENST00000439518 OR6C6A6NF89 314 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 TCF21O43680 179 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 IGHV2-5P01817 119 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 GSTM3P21266 225 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 SMIM11AP58511 58 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 SPRNQ5BIV9 151 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 ZMAT1Q5H9K5 638 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 MTX3Q5HYI7 312 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 SMARCD3Q6STE5 483 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 ZER1Q7Z7L7 766 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms