RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 TMEM106CQ9BVX2 250 aa8.83□□□□□ -1
SS18-203ENST00000415083 FOXQ1Q9C009 403 aa8.83□□□□□ -1
SS18-203ENST00000415083 SLITRK2Q9H156 845 aa8.83□□□□□ -1
SS18-203ENST00000415083 GPN1Q9HCN4 374 aaPredicted RBP8.83□□□□□ -1
SS18-203ENST00000415083 COA3Q9Y2R0 106 aaPredicted RBP8.83□□□□□ -1
SS18-203ENST00000415083 CLDN4O14493 209 aa8.83□□□□□ -1
SS18-203ENST00000415083 FADS1O60427 444 aa8.83□□□□□ -1
SS18-203ENST00000415083 CD8AP01732 235 aa8.83□□□□□ -1
SS18-203ENST00000415083 APOC3P02656 99 aa8.83□□□□□ -1
SS18-203ENST00000415083 SPARCP09486 303 aa8.83□□□□□ -1
SS18-203ENST00000415083 PRSS3P35030 304 aa8.83□□□□□ -1
SS18-203ENST00000415083 FASLGP48023 281 aa8.83□□□□□ -1
SS18-203ENST00000415083 C17orf82Q86X59 251 aaPredicted RBP8.83□□□□□ -1
SS18-203ENST00000415083 DTX1Q86Y01 620 aa8.83□□□□□ -1
SS18-203ENST00000415083 NAXDQ8IW45 347 aa8.83□□□□□ -1
SS18-203ENST00000415083 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
SS18-203ENST00000415083 COMMD4Q9H0A8 199 aa8.83□□□□□ -1
SS18-203ENST00000415083 ALX4Q9H161 411 aaPredicted RBP8.83□□□□□ -1
SS18-203ENST00000415083 TRAV36DV7A0A075B6V5 113 aa8.82□□□□□ -1
SS18-203ENST00000415083 RFPL4AA6NLU0 287 aa8.82□□□□□ -1
SS18-203ENST00000415083 RFPL4AL1F8VTS6 287 aa8.82□□□□□ -1
SS18-203ENST00000415083 DNASE2O00115 360 aaPredicted RBP8.82□□□□□ -1
SS18-203ENST00000415083 RENP00797 406 aa8.82□□□□□ -1
SS18-203ENST00000415083 IGHMP01871 453 aa8.82□□□□□ -1
SS18-203ENST00000415083 PRKACAP17612 351 aa8.82□□□□□ -1
SS18-203ENST00000415083 SPOCK1Q08629 439 aa8.82□□□□□ -1
SS18-203ENST00000415083 MPPED2Q15777 294 aa8.82□□□□□ -1
SS18-203ENST00000415083 SGCBQ16585 318 aa8.82□□□□□ -1
SS18-203ENST00000415083 FAM122CQ6P4D5 195 aa8.82□□□□□ -1
SS18-203ENST00000415083 LINC00346Q8IVM7 164 aa8.82□□□□□ -1
SS18-203ENST00000415083 EIF4E3Q8N5X7 224 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 OR2I1PQ8NGU4 316 aa8.82□□□□□ -1
SS18-203ENST00000415083 MRPL48Q96GC5 212 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 SLC46A1Q96NT5 459 aa8.82□□□□□ -1
SS18-203ENST00000415083 PRODH2Q9UF12 536 aa8.82□□□□□ -1
SS18-203ENST00000415083 MSRAQ9UJ68 235 aa8.82□□□□□ -1
SS18-203ENST00000415083 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
SS18-203ENST00000415083 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
SS18-203ENST00000415083 TMEM235A6NFC5 223 aa8.82□□□□□ -1
SS18-203ENST00000415083 RP2O75695 350 aa8.82□□□□□ -1
SS18-203ENST00000415083 FSTP19883 344 aa8.82□□□□□ -1
SS18-203ENST00000415083 DRD1P21728 446 aa8.82□□□□□ -1
SS18-203ENST00000415083 ABCD3P28288 659 aa8.82□□□□□ -1
SS18-203ENST00000415083 NR0B1P51843 470 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 PMPCAQ10713 525 aa8.82□□□□□ -1
SS18-203ENST00000415083 DHRS2Q13268 280 aa8.82□□□□□ -1
SS18-203ENST00000415083 GK2Q14410 553 aaPredicted RBP8.82□□□□□ -1
SS18-203ENST00000415083 TMEM229BQ8NBD8 167 aa8.82□□□□□ -1
SS18-203ENST00000415083 MRPL38Q96DV4 380 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 ARL5BQ96KC2 179 aa8.82□□□□□ -1
SS18-203ENST00000415083 GAL3ST4Q96RP7 486 aa8.82□□□□□ -1
SS18-203ENST00000415083 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
SS18-203ENST00000415083 MNTQ99583 582 aa8.82□□□□□ -1
SS18-203ENST00000415083 TXNIPQ9H3M7 391 aa8.82□□□□□ -1
SS18-203ENST00000415083 MRPS33Q9Y291 106 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 TMED7Q9Y3B3 224 aa8.82□□□□□ -1
SS18-203ENST00000415083 EMC9Q9Y3B6 208 aa8.82□□□□□ -1
SS18-203ENST00000415083 A0A0A6YYD4 124 aa8.82□□□□□ -1
SS18-203ENST00000415083 ALG1L2C9J202 215 aa8.82□□□□□ -1
SS18-203ENST00000415083 RAB27BO00194 218 aa8.82□□□□□ -1
SS18-203ENST00000415083 EFNA2O43921 213 aa8.82□□□□□ -1
SS18-203ENST00000415083 ZNF432O94892 652 aa8.82□□□□□ -1
SS18-203ENST00000415083 HTR2CP28335 458 aa8.82□□□□□ -1
SS18-203ENST00000415083 ADAM8P78325 824 aa8.82□□□□□ -1
SS18-203ENST00000415083 EIF2B1Q14232 305 aaKnown RBP8.82□□□□□ -1
SS18-203ENST00000415083 PCK2Q16822 640 aa8.82□□□□□ -1
SS18-203ENST00000415083 ZNF260Q3ZCT1 412 aa8.82□□□□□ -1
SS18-203ENST00000415083 OR52W1Q6IF63 320 aa8.82□□□□□ -1
SS18-203ENST00000415083 LRFN4Q6PJG9 635 aa8.82□□□□□ -1
SS18-203ENST00000415083 TMPPEQ6ZT21 453 aa8.82□□□□□ -1
SS18-203ENST00000415083 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
SS18-203ENST00000415083 TTLL10Q6ZVT0 673 aa8.82□□□□□ -1
SS18-203ENST00000415083 SLC26A10Q8NG04 563 aa8.82□□□□□ -1
SS18-203ENST00000415083 AQP3Q92482 292 aa8.82□□□□□ -1
SS18-203ENST00000415083 AIFM2Q9BRQ8 373 aa8.82□□□□□ -1
SS18-203ENST00000415083 EXO5Q9H790 373 aa8.82□□□□□ -1
SS18-203ENST00000415083 PTGES2Q9H7Z7 377 aa8.82□□□□□ -1
SS18-203ENST00000415083 SLC17A5Q9NRA2 495 aa8.82□□□□□ -1
SS18-203ENST00000415083 CEP192Q8TEP8 1941 aa8.81□□□□□ -1
SS18-203ENST00000415083 TMED7-TICAM2A0A0A6YYA0 188 aa8.81□□□□□ -1
SS18-203ENST00000415083 A0A1W2PPC4 97 aa8.81□□□□□ -1
SS18-203ENST00000415083 TOR1AO14656 332 aa8.81□□□□□ -1
SS18-203ENST00000415083 SSX5O60225 188 aa8.81□□□□□ -1
SS18-203ENST00000415083 MYF5P13349 255 aa8.81□□□□□ -1
SS18-203ENST00000415083 CTSEP14091 401 aa8.81□□□□□ -1
SS18-203ENST00000415083 GLULP15104 373 aa8.81□□□□□ -1
SS18-203ENST00000415083 ZBTB25P24278 435 aa8.81□□□□□ -1
SS18-203ENST00000415083 CCR5P51681 352 aa8.81□□□□□ -1
SS18-203ENST00000415083 LIN54Q6MZP7 749 aa8.81□□□□□ -1
SS18-203ENST00000415083 CRIP3Q6Q6R5 217 aa8.81□□□□□ -1
SS18-203ENST00000415083 ADAD2Q8NCV1 583 aaKnown RBP8.81□□□□□ -1
SS18-203ENST00000415083 BHLHE23Q8NDY6 225 aa8.81□□□□□ -1
SS18-203ENST00000415083 MFFQ9GZY8 342 aa8.81□□□□□ -1
SS18-203ENST00000415083 TMEM138Q9NPI0 162 aa8.81□□□□□ -1
SS18-203ENST00000415083 PLCL2Q9UPR0 1127 aa8.81□□□□□ -1
SS18-203ENST00000415083 TMEM82A0PJX8 343 aa8.81□□□□□ -1
SS18-203ENST00000415083 BLACEA4D250 179 aa8.81□□□□□ -1
SS18-203ENST00000415083 SHISA8B8ZZ34 492 aa8.81□□□□□ -1
SS18-203ENST00000415083 C4orf46Q504U0 113 aa8.81□□□□□ -1
SS18-203ENST00000415083 BEX5Q5H9J7 111 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms