RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 HCAR3P49019 387 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 LUZP6Q538Z0 58 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 SOHLH1Q5JUK2 328 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 C10orf120Q5SQS8 335 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 LDLRAD2Q5SZI1 272 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 C1orf220Q5T0J3 134 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 LIN9Q5TKA1 542 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 GID4Q8IVV7 300 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 EIF4E3Q8N5X7 224 aaKnown RBP-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZNF713Q8N859 430 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 MRPL43Q8N983 215 aaKnown RBP-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 STEAP2Q8NFT2 490 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC26A10Q8NG04 563 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAM3CQ92520 227 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 UBE2E3Q969T4 207 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 EFHD2Q96C19 240 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 TMEM117Q9H0C3 514 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 TUBA4BQ9H853 241 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZWILCHQ9H900 591 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 RPH3ALQ9UNE2 315 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 KCNIP3Q9Y2W7 256 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 A0A1B0GUH1 482 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 LY6LH3BQJ8 138 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 ATP5LO75964 103 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 AIFM1O95831 613 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 IGHV2-5P01817 119 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 CALM1P0DP23 149 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 CALM2P0DP24 149 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 CALM3P0DP25 149 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 THRAP10827 490 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 NT5EP21589 574 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 AHCYP23526 432 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 QARSP47897 775 aaKnown RBP-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 UGT2B15P54855 530 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 CDKN2DP55273 166 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 GFERP55789 205 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 RCAN2Q14206 197 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 GANABQ14697 944 aaKnown RBP-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 MORF4L2Q15014 288 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 SFT2D3Q587I9 215 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 H3F3CQ6NXT2 135 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 KCNIP4Q6PIL6 250 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR4M1Q8NGD0 313 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 SEH1LQ96EE3 360 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 RIT2Q99578 217 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 ADPGKQ9BRR6 497 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 ACAT2Q9BWD1 397 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 HMGXB4Q9UGU5 601 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 CSDC2Q9Y534 153 aaKnown RBP-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 FRAS1Q86XX4 4008 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 PALLDQ8WX93 1383 aa-0.59□□□□□ -2.5
RNU6-239P-201ENST00000390990 ATG2BQ96BY7 2078 aa-0.6□□□□□ -2.5
RNU6-239P-201ENST00000390990 IGKV1D-37A0A075B6S9 117 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 OR6C74A6NCV1 312 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 GGTLC3B5MD39 225 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 NDUFC2-KCTD14E9PQ53 114 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 PSCAO43653 123 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 FMO6PO60774 539 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 NEBLO76041 1014 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 CTSLP07711 333 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 HSP90AB1P08238 724 aaKnown RBP-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 OR1G1P47890 313 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 TGM4P49221 684 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ERFP50548 548 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ST3GAL4Q11206 333 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 C1orf61Q13536 156 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 TCEAL5Q5H9L2 206 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ENPP6Q6UWR7 440 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 PCGF5Q86SE9 256 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ECHDC2Q86YB7 292 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ZNF645Q8N7E2 425 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 OR2Z1Q8NG97 314 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 OR10T2Q8NGX3 314 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 TCEAL3Q969E4 200 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 NSMCE2Q96MF7 247 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ZNF75AQ96N20 296 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 SORT1Q99523 831 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 MEAF6Q9HAF1 191 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 ATXN10Q9UBB4 475 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 SUN2Q9UH99 717 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 DDX19BQ9UMR2 479 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 AURKCQ9UQB9 309 aa-0.6□□□□□ -2.51
RNU6-239P-201ENST00000390990 UBE4BO95155 1302 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 MDC1Q14676 2089 aaKnown RBP-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 CRB1P82279 1406 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 MYBPHLA2RUH7 354 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 GABRR3A8MPY1 467 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 G3V3Q6 166 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 L7N2F9 121 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 OR1F1O43749 312 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 PALMO75781 387 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 EIF3GO75821 320 aaKnown RBP eCLIP-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 RPN2P04844 631 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 FGF1P05230 155 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 ZNF708P17019 499 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 HMGB2P26583 209 aaKnown RBP-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 SFNP31947 248 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 CEACAM3P40198 252 aa-0.61□□□□□ -2.51
RNU6-239P-201ENST00000390990 TSC22D1Q15714 1073 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms