RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNF317Q96PQ6 595 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SRXN1Q9BYN0 137 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IL22Q9GZX6 179 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 WDR55Q9H6Y2 383 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GPATCH2LQ9NWQ4 482 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 QPCTLQ9NXS2 382 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CHMP5Q9NZZ3 219 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 KLHL21Q9UJP4 597 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ING4Q9UNL4 249 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SAMD4AQ9UPU9 718 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ARHGAP35Q9NRY4 1499 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 COL4A6Q14031 1691 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PLEKHH2Q8IVE3 1493 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 C4AP0C0L4 1744 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 C4BP0C0L5 1744 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TVP23AA6NH52 213 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 NCBP2LA6PVI3 153 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF879B4DU55 563 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SIRPB1O00241 398 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ACOT8O14734 319 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ENSAO43768 121 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CLDN11O75508 207 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ADAP1O75689 374 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TDP2O95551 362 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 KLK3P07288 261 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RHOXF2BP0C7M4 288 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 UBTFL6P0CB48 400 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 NQO2P16083 231 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PRKACBP22694 351 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FASP25445 335 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RRM2P31350 389 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 AQP2P41181 271 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 VDAC2P45880 294 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLC10A7Q0GE19 358 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TNXAQ16473 311 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF620Q6ZNG0 422 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF621Q6ZSS3 439 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 UTS2BQ765I0 119 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PRSS41Q7RTY9 318 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RBM45Q8IUH3 476 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IQCKQ8N0W5 287 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLC39A11Q8N1S5 342 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 C8orf31Q8N9H6 132 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC112Q8NEF3 446 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 OR9G1Q8NH87 305 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 EEF1AKMT3Q96AZ1 226 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 C8orf44Q96CB5 159 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLC45A3Q96JT2 553 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 XPO6Q96QU8 1125 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 VGLL1Q99990 258 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RHOXF2Q9BQY4 288 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ILKAPQ9H0C8 392 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM38AQ9H6F2 299 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SP140LQ9H930 580 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LZTFL1Q9NQ48 299 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MS4A12Q9NXJ0 267 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GIN1Q9NXP7 522 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ADA2Q9NZK5 511 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CTSFQ9UBX1 484 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 C15orf41Q9Y2V0 281 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MRPL11Q9Y3B7 192 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LOC285556D6RIA3 1793 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 KDM6AO15550 1401 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 XRN1Q8IZH2 1706 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IGLV7-46A0A075B6I9 117 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV3-35A0A0C4DH35 117 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 HSBP1L1C9JCN9 74 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 E7ESA3 106 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RFXANKO14593 260 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TRDMT1O14717 391 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 INSIG1O15503 277 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IGLV1-44P01699 117 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLC1A1P43005 524 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MAGEA9P43362 315 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CSNK1DP48730 415 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MYL6P60660 151 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF266Q14584 549 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SAMD4BQ5PRF9 694 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 VAX1Q5SQQ9 334 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RNLSQ5VYX0 342 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TIGD3Q6B0B8 471 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LCN12Q6JVE5 192 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LINC00336Q6ZUF6 198 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RALGPS2Q86X27 583 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MFSD6LQ8IWD5 586 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SYCE1Q8N0S2 351 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM61Q8N0U2 210 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FTMTQ8N4E7 242 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TTC29Q8NA56 475 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PYROXD1Q8WU10 500 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TCTEX1D2Q8WW35 142 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ATF6BQ99941 703 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MAP1LC3CQ9BXW4 147 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 RAB1BQ9H0U4 201 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 OPN3Q9H1Y3 402 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PIGUQ9H490 435 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLCO1B3Q9NPD5 702 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MRM2Q9UI43 246 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PLLPQ9Y342 182 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms