RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NPR2P20594 1047 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CDC20Q12834 499 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 AGAP7PQ5VUJ5 663 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CREB3L2Q70SY1 520 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 TRILQ7L0X0 811 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF554Q86TJ5 538 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 LRRTM1Q86UE6 522 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 GGNQ86UU5 652 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CMTM4Q8IZR5 234 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 GDPD1Q8N9F7 314 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 PLPP7Q8NBV4 271 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF671Q8TAW3 534 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC7A6Q92536 515 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 G6PC2Q9NQR9 355 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF319Q9P2F9 582 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 MYEF2Q9P2K5 600 aaKnown RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ASH2LQ9UBL3 628 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CSAG2Q9Y5P2 127 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 STMND1H3BQB6 276 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNHIT1O43257 154 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 WISP2O76076 250 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 PTTG1O95997 202 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 IGHG1P01857 330 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ITGB2P05107 769 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CD1AP06126 327 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 PRKAR1AP10644 381 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 WT1P19544 449 aaPredicted RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 GDF1P27539 372 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 LAP3P28838 519 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 PRKXP51817 358 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 RIDAP52758 137 aaKnown RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 RAC1P63000 192 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 GABREP78334 506 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC35A1P78382 337 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 DGCR2P98153 550 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SRYQ05066 204 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SCN1BQ07699 218 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CSRP2Q16527 193 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 PCK2Q16822 640 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 THEM4Q5T1C6 240 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 RNF144BQ7Z419 303 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 LRRC28Q86X40 367 aaPredicted RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 CATSPERDQ86XM0 798 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 LRRC18Q8N456 261 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 NOXO1Q8NFA2 376 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 OR6X1Q8NH79 312 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC25A43Q8WUT9 341 aaPredicted RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 TSEN15Q8WW01 171 aaKnown RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 ASB5Q8WWX0 329 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 HPS1Q92902 700 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC25A38Q96DW6 304 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 MRPL48Q96GC5 212 aaKnown RBP6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 TMEM41AQ96HV5 264 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 GPR87Q9BY21 358 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 TCF7L1Q9HCS4 588 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 V9GY05 133 aa6.56□□□□□ -1.36
SRFBP1-201ENST00000339397 A0A0B4J293 547 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 TMEM212A6NML5 194 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF726A6NNF4 738 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 FAM166BA8MTA8 275 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 TNFRSF10AO00220 468 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 P2RY10O00398 339 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 SMAD9O15198 467 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 EEF1E1O43324 174 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 CXCL13O43927 109 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 ZNF254O75437 659 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 PMS2P2O95744 297 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 ITGA5P08648 1049 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 CAPZA2P47755 286 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 PITPNBP48739 271 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 EFNB2P52799 333 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 RAB25P57735 213 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 SGCAQ16586 387 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 HIST3H3Q16695 136 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 KCTD18Q6PI47 426 aaPredicted RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 TMPRSS7Q7RTY8 843 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 BIVMQ86UB2 503 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 TMPRSS12Q86WS5 348 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 PRSS33Q8NF86 280 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 GPR148Q8TDV2 347 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 ACOT12Q8WYK0 555 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 SLAMF6Q96DU3 332 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 GAL3ST1Q99999 423 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 COMMD4Q9H0A8 199 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 DDX28Q9NUL7 540 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 MRPL15Q9P015 296 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 OR5V1Q9UGF6 321 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 GDF2Q9UK05 429 aaPredicted RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 POU2F3Q9UKI9 436 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 PCDHGA9Q9Y5G4 932 aaKnown RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 PCDHGA1Q9Y5H4 931 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 MYO7BQ6PIF6 2116 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 RP1L1Q8IWN7 2480 aaPredicted RBP6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 A0A087WZY1 265 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 TRBV5-7A0A0A0MS05 114 aa6.55□□□□□ -1.36
SRFBP1-201ENST00000339397 NPIPB13A6NJU9 1138 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms