RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 OR51D1Q8NGF3 324 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 GHITMQ9H3K2 345 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 DOK2O60496 412 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 ECDO95905 644 aaPredicted RBP19.21■□□□□ 0.67
CLN6-224ENST00000638076 ITGA5P08648 1049 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 COX6A1P12074 109 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 MAB21L1Q13394 359 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 SLC23A3Q6PIS1 610 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 NHLRC1Q6VVB1 395 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 UEVLDQ8IX04 471 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 FADS6Q8N9I5 356 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 IMMP1LQ96LU5 166 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 RBP7Q96R05 134 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 ZNF700Q9H0M5 742 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 SMOC1Q9H4F8 434 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 PTGES2Q9H7Z7 377 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 HRASLSQ9HDD0 168 aa19.21■□□□□ 0.67
CLN6-224ENST00000638076 ARPC4-TTLL3A0A0A6YYG9 625 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 SFTPDP35247 375 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 SIGLEC14Q08ET2 396 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 TMEM225Q6GV28 225 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 BTN2A1Q7KYR7 527 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 GPAT4Q86UL3 456 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 MED28Q9H204 178 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 HS3ST3B1Q9Y662 390 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 GMDSO60547 372 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 C1QBP02746 253 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 HRGP04196 525 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 H2AFB2P0C5Z0 115 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 CFPP27918 469 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 MNDAP41218 407 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 P2RY4P51582 365 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 MRPS10P82664 201 aaKnown RBP19.2■□□□□ 0.66
CLN6-224ENST00000638076 FCN2Q15485 313 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 LPAL2Q16609 132 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 C11orf40Q8WZ69 217 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 TMEM246Q9BRR3 403 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 MRPL13Q9BYD1 178 aaKnown RBP19.2■□□□□ 0.66
CLN6-224ENST00000638076 G6PC2Q9NQR9 355 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 CENPMQ9NSP4 180 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 KLHL13Q9P2N7 655 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 OR52A1Q9UKL2 312 aa19.2■□□□□ 0.66
CLN6-224ENST00000638076 CD2P06729 351 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 ERP29P30040 261 aaKnown RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 AP3S2P59780 193 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 FAPQ12884 760 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 EXT1Q16394 746 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 TMEM255AQ5JRV8 349 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 SFRP4Q6FHJ7 346 aaPredicted RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 TMEM53Q6P2H8 277 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 SLC7A5P1Q8MH63 180 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 PLPP7Q8NBV4 271 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 NKX3-1Q99801 234 aaPredicted RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 CKLFQ9UBR5 152 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 TMEM269A0A1B0GVZ9 245 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 A0A1W2PQ72 361 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 SMLR1H3BR10 107 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 EIF1AYO14602 144 aaKnown RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 LDOC1O95751 146 aaPredicted RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 SYPP08247 313 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 POU3F4P49335 361 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 GZMKP49863 264 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 EFNB2P52799 333 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 SNTA1Q13424 505 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 CAMK2DQ13557 499 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.19■□□□□ 0.66
CLN6-224ENST00000638076 LIX1LQ8IVB5 337 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 ADPRHL1Q8NDY3 354 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 OR10H5Q8NGA6 315 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 C15orf40Q8WUR7 153 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 TAS2R4Q9NYW5 299 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 WDFY4Q6ZS81 3184 aa19.19■□□□□ 0.66
CLN6-224ENST00000638076 ZNF814B7Z6K7 855 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 ACOT7O00154 380 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 GLSO94925 669 aaPredicted RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 H2BFMP0C1H6 154 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 STOMP27105 288 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 CLRN1P58418 232 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 RAB11BQ15907 218 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 GSG1Q2KHT4 349 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 TMEM176BQ3YBM2 270 aaPredicted RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 DEGS2Q6QHC5 323 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 ASCC1Q8N9N2 400 aaKnown RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 RNF133Q8WVZ7 376 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 OR51J1Q9H342 316 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 KCNK15Q9H427 330 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 TMEM165Q9HC07 324 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 SLC39A1Q9NY26 324 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 HHLA2Q9UM44 414 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 LOC107986453A0A1B0GWG9 222 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 SLC17A2O00624 439 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 XRCC3O43542 346 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 ADH6P28332 368 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 EIF1P41567 113 aaKnown RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 EIF1AXP47813 144 aaKnown RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 C2orf76Q3KRA6 126 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 THEM4Q5T1C6 240 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 OPN5Q6U736 354 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 OR13C3Q8NGS6 347 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 OR2Y1Q8NGV0 311 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms