RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 JAZF1Q86VZ6 243 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 HIPK1Q86Z02 1210 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 GLB1L2Q8IW92 636 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 CLDN22Q8N7P3 220 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 CPEB3Q8NE35 698 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 AKR7LQ8NHP1 331 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 FANK1Q8TC84 345 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 HPS1Q92902 700 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 GPX7Q96SL4 187 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 ZNF416Q9BWM5 594 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 BEX2Q9BXY8 128 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 CHODLQ9H9P2 273 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 CYSLTR2Q9NS75 346 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 POLR1DQ9Y2S0 133 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 IER3IP1Q9Y5U9 82 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 ABCA1O95477 2261 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 JMJD1CQ15652 2540 aa12.37□□□□□ -0.43
PKNOX1-210ENST00000607049 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 SOCS2O14508 198 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 NAT2P11245 290 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ACHEP22303 614 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 CALB2P22676 271 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 TUBG1P23258 451 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 RRM2P31350 389 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 LIPAP38571 399 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 CENPAP49450 140 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 TMEM33P57088 247 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 MAD2L1BPQ15013 274 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 MESTQ5EB52 335 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 FAM209AQ5JX71 171 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 FAM122BQ7Z309 247 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 LRP11Q86VZ4 500 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ZDHHC21Q8IVQ6 265 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 POM121L2Q96KW2 1035 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 COG8Q96MW5 612 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 TUBG2Q9NRH3 451 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ACTR3BQ9P1U1 418 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 ZANQ9Y493 2812 aa12.36□□□□□ -0.43
PKNOX1-210ENST00000607049 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 IGHV4-61A0A0C4DH41 118 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 C17orf100A8MU93 164 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 H3BSA7 217 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 IMPA2O14732 288 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 SGCEO43556 437 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 LMX1BO60663 402 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 ABHD16AO95870 558 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 RENP00797 406 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 COX5BP10606 129 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 GSTM3P21266 225 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 FPR3P25089 353 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 GPR6P46095 362 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 HTR5AP47898 357 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 AQP6Q13520 282 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 SEC23BQ15437 767 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 RFX4Q33E94 735 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 RPL13AP3Q6NVV1 102 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 DHFR2Q86XF0 187 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 FITM2Q8N6M3 262 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 ABHD4Q8TB40 342 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 GNPDA2Q8TDQ7 276 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 RASD2Q96D21 266 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 LRGUKQ96M69 825 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 IFT27Q9BW83 186 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 WNT5BQ9H1J7 359 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 VSX1Q9NZR4 365 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 IL20RAQ9UHF4 553 aa12.35□□□□□ -0.43
PKNOX1-210ENST00000607049 LOC100509620A0A075B734 347 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 IDH3BO43837 385 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 DOK2O60496 412 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 TXNDC12O95881 172 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 CLPTM1O96005 669 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 TGFAP01135 160 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 SEMG1P04279 462 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 TACSTD2P09758 323 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 PCMT1P22061 227 aa12.34□□□□□ -0.43
PKNOX1-210ENST00000607049 RIN1Q13671 783 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms