RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 TAF11Q15544 211 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 SLC36A2Q495M3 483 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 NRN1LQ496H8 165 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 TMEM53Q6P2H8 277 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 AQP12AQ8IXF9 295 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 LRRC18Q8N456 261 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 LRRC75AQ8NAA5 344 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 OR51A7Q8NH64 312 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.33
TGFB1-202ENST00000597453 RACGAP1Q9H0H5 632 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 CDH20Q9HBT6 801 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 TAAR3PQ9P1P4 343 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 ZNF346Q9UL40 294 aaKnown RBP12.96□□□□□ -0.33
TGFB1-202ENST00000597453 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.33
TGFB1-202ENST00000597453 IGLV3-9A0A075B6K5 115 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 GSC2O15499 205 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 ENTPD5O75356 428 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 RP2O75695 350 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 KRT36O76013 467 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 SNAP29O95721 258 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 RAP2AP10114 183 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 ZNF250P15622 560 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 HOXB6P17509 224 aaKnown RBP12.95□□□□□ -0.34
TGFB1-202ENST00000597453 CDAP32320 146 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 ZNF84P51523 738 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-202ENST00000597453 FMODQ06828 376 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 FLOT2Q14254 428 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 NKPD1Q17RQ9 610 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 ZBED5Q49AG3 693 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 FAM205BPQ63HN1 556 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 DPPA2Q7Z7J5 298 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
TGFB1-202ENST00000597453 NDEL1Q9GZM8 345 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 LPAR2Q9HBW0 351 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 AURKCQ9UQB9 309 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
TGFB1-202ENST00000597453 SLC22A23A1A5C7 686 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 C17orf100A8MU93 164 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 B4DSR2 109 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 PPIHO43447 177 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 LCKP06239 509 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 ZNF26P17031 533 aaPredicted RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 SRP14P37108 136 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 IFNGR2P38484 337 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 HMGA2P52926 109 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 UCP2P55851 309 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 KLF3P57682 345 aaPredicted RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 CTXN1P60606 82 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 RPL27P61353 136 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 MRPS11P82912 194 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 TBC1D28Q2M2D7 210 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 UGT2A3Q6UWM9 527 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 IGFN1Q86VF2 1251 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 ADGRG5Q8IZF4 528 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 CPEB3Q8NE35 698 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 ZNF519Q8TB69 540 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 SYNPRQ8TBG9 265 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 GTF3AQ92664 365 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 NABP1Q96AH0 204 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 HINT3Q9NQE9 182 aaKnown RBP12.94□□□□□ -0.34
TGFB1-202ENST00000597453 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 POMPQ9Y244 141 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 SIGLEC7Q9Y286 467 aa12.94□□□□□ -0.34
TGFB1-202ENST00000597453 IQCMA0A1B0GVH7 501 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 DHRS12A0PJE2 317 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 ANKRD65E5RJM6 399 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 OR10H3O60404 316 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 CDC14BO60729 498 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 PTP4A3O75365 173 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 NDUFB2O95178 105 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 NR2C1P13056 603 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 FPR3P25089 353 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 RPL4P36578 427 aaKnown RBP12.93□□□□□ -0.34
TGFB1-202ENST00000597453 TMEM33P57088 247 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 CCL8P80075 99 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 MRPS34P82930 218 aaKnown RBP12.93□□□□□ -0.34
TGFB1-202ENST00000597453 GLO1Q04760 184 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 PLP2Q04941 152 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 PABPC1L2AQ5JQF8 200 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 OR2T5Q6IEZ7 315 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 ZER1Q7Z7L7 766 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 GLCCI1Q86VQ1 547 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 LINC00471Q8N535 108 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 RFLNBQ8N5W9 214 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 CLDN22Q8N7P3 220 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 ICA1LQ8NDH6 482 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
TGFB1-202ENST00000597453 OR1J2Q8NGS2 313 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms