RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 DCTN6O00399 190 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 BHLHE40O14503 412 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 XKRYO14609 159 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 OR10H3O60404 316 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 KHDRBS3O75525 346 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 GASTP01350 101 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 IGHV3-13P01766 116 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ADH4P08319 380 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RAP2AP10114 183 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 GAAP10253 952 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 APEX1P27695 318 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 CRABP1P29762 137 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 SLC6A6P31641 620 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RPL4P36578 427 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 WNT5AP41221 380 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 PDLIM4P50479 330 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 MRPS11P82912 194 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 GALK2Q01415 458 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 KRR1Q13601 381 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 SGCAQ16586 387 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 TBC1D28Q2M2D7 210 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 KRTAP27-1Q3LI81 207 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 DNAL1Q4LDG9 190 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 MBNL2Q5VZF2 373 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 OR2T5Q6IEZ7 315 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 CLEC2AQ6UVW9 174 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 UGT2A3Q6UWM9 527 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RASSF6Q6ZTQ3 369 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 LRP11Q86VZ4 500 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 GLB1L2Q8IW92 636 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ALDH16A1Q8IZ83 802 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ADGRG5Q8IZF4 528 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 OR6V1Q8N148 313 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ZNF786Q8N393 782 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 SVOPLQ8N434 492 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 LNX2Q8N448 690 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ZNF525Q8N782 197 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 NPEPL1Q8NDH3 523 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 OR2T29Q8NH02 315 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 FAM168AQ92567 244 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RASD2Q96D21 266 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 MARS2Q96GW9 593 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 C1orf159Q96HA4 380 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 CLPTM1LQ96KA5 538 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 THTPAQ9BU02 230 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 NUAK2Q9H093 628 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RACGAP1Q9H0H5 632 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 MS4A5Q9H3V2 200 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RNF121Q9H920 327 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 CCNB1IP1Q9NPC3 277 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 TBCCD1Q9NVR7 557 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 VNN3Q9NY84 501 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 NKIRAS2Q9NYR9 191 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 MYEF2Q9P2K5 600 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ATPIF1Q9UII2 106 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 TMCC3Q9ULS5 477 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 B9D1Q9UPM9 204 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 FKBP7Q9Y680 259 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 V9GYQ6 96 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 SONP18583 2426 aaKnown RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 TCRBV3S1A0A5B6 114 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 OR6C68A6NDL8 312 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 OR6C6A6NF89 314 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 H7C1C5 153 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 GSC2O15499 205 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 TLX2O43763 284 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CD5LO43866 347 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 SLC16A7O60669 478 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 STAMBPO95630 424 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 TACSTD2P09758 323 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CCL2P13500 99 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 HIST1H1CP16403 213 aaKnown RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 APLNRP35414 380 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 GUCA1AP43080 201 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 NR4A2P43354 598 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 LCN6P62502 163 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 HSF2Q03933 536 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 COX10Q12887 443 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 AQP6Q13520 282 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 RIN1Q13671 783 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 RSPO1Q2MKA7 263 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 FAM98BQ52LJ0 330 aaKnown RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CCDC92Q53HC0 331 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 TMEM255AQ5JRV8 349 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 RGS7BPQ6MZT1 257 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 UNQ6126/PRO20091Q6UXV3 157 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 ZNF101Q8IZC7 436 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 SYNPRQ8TBG9 265 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CANT1Q8WVQ1 401 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 IPCEF1Q8WWN9 437 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 SAMD8Q96LT4 415 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 ERMAPQ96PL5 475 aaPredicted RBP7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CHID1Q9BWS9 393 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 SYT4Q9H2B2 425 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 CDH20Q9HBT6 801 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 TMEM160Q9NX00 188 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 REV1Q9UBZ9 1251 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 IL20RAQ9UHF4 553 aa7.01□□□□□ -1.29
HDGFL3-205ENST00000568129 NDRG4Q9ULP0 352 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms