RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR52E2Q8NGJ4 325 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 AKR7LQ8NHP1 331 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 ZNRF4Q8WWF5 429 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 C11orf40Q8WZ69 217 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 KCNS3Q9BQ31 491 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
CLK3-220ENST00000567992 TSSK6Q9BXA6 273 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 OR2H1Q9GZK4 316 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 RACGAP1Q9H0H5 632 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 CXorf56Q9H5V9 222 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 CBLN4Q9NTU7 201 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 RTTNQ86VV8 2226 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 LOC100509620A0A075B734 347 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 TMEM129A0AVI4 362 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 H3BNX3 289 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 NDUFS7O75251 213 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 CIB2O75838 187 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 SNAP29O95721 258 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 TFP02787 698 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 PSKH1P11801 424 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 APEX1P27695 318 aaKnown RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 NOS3P29474 1203 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 RIPK1Q13546 671 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 DAG1Q14118 895 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 KPNB1Q14974 876 aaKnown RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 EFNB3Q15768 340 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 MEP1BQ16820 701 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 ZNF774Q6NX45 483 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 VHLLQ6RSH7 139 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 SYT9Q86SS6 491 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 TGIF2LYQ8IUE0 185 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 LURAP1LQ8IV03 231 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 FBXL14Q8N1E6 418 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 CYB561A3Q8NBI2 242 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 SLC26A10Q8NG04 563 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 OR2T33Q8NG76 320 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 LRTOMTQ8WZ04 291 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 NRBF2Q96F24 287 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 POM121L2Q96KW2 1035 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 CACNG6Q9BXT2 260 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 NMNAT2Q9BZQ4 307 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 C1orf198Q9H425 327 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 RERGLQ9H628 205 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 RNF121Q9H920 327 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 CCNB1IP1Q9NPC3 277 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 RPRD1BQ9NQG5 326 aaKnown RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 MRPL22Q9NWU5 206 aaKnown RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
CLK3-220ENST00000567992 BAIAP2Q9UQB8 552 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 AP4S1Q9Y587 144 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 FKBP7Q9Y680 259 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 LHFPL6Q9Y693 200 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 MTORP42345 2549 aa8.45□□□□□ -1.06
CLK3-220ENST00000567992 C12orf71A8MTZ7 269 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 FAM171A2A8MVW0 826 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 H7C417 338 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 ICMTO60725 284 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 RENP00797 406 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 OR4A8P0C604 315 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 OSMP13725 252 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 ANXA8P13928 327 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 FASP25445 335 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 STOMP27105 288 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 CRABP1P29762 137 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 GRK5P34947 590 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 GLRXP35754 106 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 SERPINF1P36955 418 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 WNT5AP41221 380 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 DAPP51397 102 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 ATP5J2P56134 94 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 PCBD1P61457 104 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 LSM6P62312 80 aaKnown RBP8.44□□□□□ -1.06
CLK3-220ENST00000567992 HIST1H3AP68431 136 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 HSF2Q03933 536 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 AQP6Q13520 282 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 CRMP1Q14194 572 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 TBC1D28Q2M2D7 210 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 HIST2H3PS2Q5TEC6 136 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 ACSM5Q6NUN0 579 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 DNM1P34Q6PK57 102 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 PRSS57Q6UWY2 283 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 DNM1P46Q6ZS02 220 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 HIST2H3AQ71DI3 136 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 VASH1Q7L8A9 365 aaPredicted RBP8.44□□□□□ -1.06
CLK3-220ENST00000567992 ZNF101Q8IZC7 436 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 OR5K1Q8NHB7 308 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 TEX47Q8TBZ9 253 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 PYDC1Q8WXC3 89 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 WACQ9BTA9 647 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 HCAR1Q9BXC0 346 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 MRPL37Q9BZE1 423 aaKnown RBP8.44□□□□□ -1.06
CLK3-220ENST00000567992 PLK3Q9H4B4 646 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 SRA1Q9HD15 236 aaKnown RBP8.44□□□□□ -1.06
CLK3-220ENST00000567992 DLL4Q9NR61 685 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 CMC2Q9NRP2 79 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 ASH2LQ9UBL3 628 aa8.44□□□□□ -1.06
CLK3-220ENST00000567992 TIMM10BQ9Y5J6 103 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms