RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TRIM36Q9NQ86 728 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 ACOXLQ9NUZ1 547 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 MED29Q9NX70 200 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 PLA2G3Q9NZ20 509 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 LRFN1Q9P244 771 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 PLEKHB1Q9UF11 243 aaPredicted RBP5.81□□□□□ -1.48
CAPN3-210ENST00000561817 WASF3Q9UPY6 502 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 CACNA1AO00555 2505 aa5.81□□□□□ -1.48
CAPN3-210ENST00000561817 NCOR2Q9Y618 2525 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 A0A087WV48 116 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 A0A0G2JK05 382 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 IQCMA0A1B0GVH7 501 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CD8B2A6NJW9 211 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NPIPA5E9PKD4 350 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 H0YC42 278 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 LINC01387J3KSC0 135 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SULT2B1O00204 365 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NKX2-8O15522 239 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 KLK10O43240 276 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TLX3O43711 291 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NME2P1O60361 137 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SRSF10O75494 262 aaKnown RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SULT1C4O75897 302 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF432O94892 652 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CDRT1O95170 752 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 MPZL1O95297 269 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 WNT11O96014 354 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 F10P00742 488 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 HPNP05981 417 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CD8BP10966 210 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NME2P22392 152 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ITGA3P26006 1051 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CRABP1P29762 137 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SDC2P34741 201 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CD97P48960 835 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CENPAP49450 140 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 GBX2P52951 348 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 BLVRAP53004 296 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SUCLG1P53597 346 aaKnown RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 BIDP55957 195 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CLDN20P56880 219 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ROM1Q03395 351 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 FMODQ06828 376 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 EGR3Q06889 387 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SLC17A1Q14916 467 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 OR1C1Q15619 314 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TRAM1Q15629 374 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ST3GAL2Q16842 350 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CCDC58Q4VC31 144 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ABHD17BQ5VST6 288 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 RAET1LQ5VY80 246 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 OTPQ5XKR4 325 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 LIN54Q6MZP7 749 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 RPL22L1Q6P5R6 122 aaKnown RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ARL9Q6T311 187 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 IGFL2Q6UWQ7 119 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 FOXL2NBQ6ZUU3 175 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TRILQ7L0X0 811 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 DPY19L4Q7Z388 723 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 KCTD20Q7Z5Y7 419 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 CCDC190Q86UF4 302 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NR2C2APQ86WQ0 139 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SULF2Q8IWU5 870 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 OR8H3Q8N146 312 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 GALNT16Q8N428 558 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF248Q8NDW4 579 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 OR6X1Q8NH79 312 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ABHD4Q8TB40 342 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 HSD17B8Q92506 261 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 HTRA1Q92743 480 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 GHSRQ92847 366 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 BORCS5Q969J3 196 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TMEM54Q969K7 222 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SMIM19Q96E16 107 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SCMH1Q96GD3 660 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 KCTD7Q96MP8 289 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 OR8B4Q96RC9 309 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 INTS14Q96SY0 518 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 FAM173AQ9BQD7 235 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 PIGQQ9BRB3 760 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 UTP23Q9BRU9 249 aaKnown RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 EMC6Q9BV81 110 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TMED9Q9BVK6 235 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TTTY10Q9BZA0 68 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF552Q9H707 407 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SNTG1Q9NSN8 517 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 SLCO1C1Q9NYB5 712 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ZMAT5Q9UDW3 170 aaKnown RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TEKT2Q9UIF3 430 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 KCNG2Q9UJ96 466 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ING1Q9UK53 422 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 DKKL1Q9UK85 242 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 NPIPA1Q9UND3 350 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 RASD1Q9Y272 281 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 COA3Q9Y2R0 106 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-210ENST00000561817 UGT2A1Q9Y4X1 527 aa5.8□□□□□ -1.48
CAPN3-210ENST00000561817 TRBV5-5A0A0J9YX44 114 aa5.79□□□□□ -1.48
CAPN3-210ENST00000561817 ANKRD34BA5PLL1 514 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms