RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 NMD3Q96D46 503 aaKnown RBP10.33□□□□□ -0.76
TPM1-216ENST00000558910 LRGUKQ96M69 825 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 TSSK2Q96PF2 358 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 DOK1Q99704 481 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 IFT27Q9BW83 186 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 ZNF416Q9BWM5 594 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 SYT4Q9H2B2 425 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 FN3KQ9H479 309 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 ANKRD19PQ9H560 264 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 SRA1Q9HD15 236 aaKnown RBP10.33□□□□□ -0.76
TPM1-216ENST00000558910 TAAR3PQ9P1P4 343 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 REV1Q9UBZ9 1251 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 SIGLEC7Q9Y286 467 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 COA3Q9Y2R0 106 aaPredicted RBP10.33□□□□□ -0.76
TPM1-216ENST00000558910 U3KQV3 271 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 NAV3Q8IVL0 2385 aa10.33□□□□□ -0.76
TPM1-216ENST00000558910 ARFGEF3Q5TH69 2177 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 RTTNQ86VV8 2226 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 PRSS37A4D1T9 235 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 MGRN1O60291 552 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 ENTPD5O75356 428 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 PTP4A3O75365 173 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 UBOX5O94941 541 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 IGFBP1P08833 259 aaPredicted RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 MMP7P09237 267 aaPredicted RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 NR2C1P13056 603 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 DAOP14920 347 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 STOMP27105 288 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 LIMS1P48059 325 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 GDI2P50395 445 aaKnown RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 SMIM11AP58511 58 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 FXYD6P3P58550 94 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 MRPS34P82930 218 aaKnown RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 MEP1BQ16820 701 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 C1QTNF12Q5T7M4 302 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 LEG1Q6P5S2 330 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 ZNF771Q7L3S4 317 aaPredicted RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 JAZF1Q86VZ6 243 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 OR1J2Q8NGS2 313 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 OR4K13Q8NH42 304 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 WNT5BQ9H1J7 359 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 LRMDAQ9H2I8 198 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 OR52D1Q9H346 318 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 EGLN3Q9H6Z9 239 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 ZNF442Q9H7R0 627 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 SLC7A8Q9UHI5 535 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 POLR1DQ9Y2S0 133 aa10.32□□□□□ -0.76
TPM1-216ENST00000558910 SONP18583 2426 aaKnown RBP10.32□□□□□ -0.76
TPM1-216ENST00000558910 FN1P02751 2386 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 HTR3EA5X5Y0 456 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 CENPBD1B2RD01 187 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 M0R233 179 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 TPD52L2O43399 206 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 STAMBPO95630 424 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 ERCC1P07992 297 aaPredicted RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 MSR1P21757 451 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 NOS3P29474 1203 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 SDHAP31040 664 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 GLRXP35754 106 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 CDKN2AP42771 156 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 RPS6KA3P51812 740 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 RPS23P62266 143 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 ENDOGQ14249 297 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 EFNB3Q15768 340 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 FAM205BPQ63HN1 556 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 TMEM154Q6P9G4 183 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 TRPM8Q7Z2W7 1104 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 FAM122BQ7Z309 247 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 SDR9C7Q8NEX9 313 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 OR10H5Q8NGA6 315 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 ABHD4Q8TB40 342 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 GNPDA2Q8TDQ7 276 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 C11orf40Q8WZ69 217 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 SLC7A6Q92536 515 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 NMNAT3Q96T66 252 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 OR2H1Q9GZK4 316 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 NUAK2Q9H093 628 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 IL1RAPQ9NPH3 570 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 TREM2Q9NZC2 230 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 ACTR3BQ9P1U1 418 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 EIF3KQ9UBQ5 218 aaKnown RBP10.31□□□□□ -0.76
TPM1-216ENST00000558910 FBXL3Q9UKT7 428 aa10.31□□□□□ -0.76
TPM1-216ENST00000558910 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 LOC100509620A0A075B734 347 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 TCRBV5S2A0A599 114 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 LRP5LA4QPB2 252 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 NPIPB13A6NJU9 1138 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 NPIPB4C9JG80 1138 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 SYNGR3O43761 229 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 DOK2O60496 412 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 CDC14BO60729 498 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 KHDRBS3O75525 346 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms