RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 MECOMQ03112 1051 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ORC2Q13416 577 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 CYTH1Q15438 398 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 NSDHLQ15738 373 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 RGS21Q2M5E4 152 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ALKBH6Q3KRA9 238 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 RESP18Q5W5W9 173 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 C22orf42Q6IC83 251 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 SLC16A14Q7RTX9 510 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PRSS41Q7RTY9 318 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 SCD5Q86SK9 330 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 TMEM135Q86UB9 458 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 LRRC34Q8IZ02 419 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PRR22Q8IZ63 422 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 OFCC1Q8IZS5 231 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 C6orf223Q8N319 242 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 CSGALNACT2Q8N6G5 542 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 NKAPP1Q8N9T2 125 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 OR9G1Q8NH87 305 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 FANK1Q8TC84 345 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ACOT11Q8WXI4 607 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PEX13Q92968 403 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 TLCD1Q96CP7 247 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF317Q96PQ6 595 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 TMEM109Q9BVC6 243 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 RIOK2Q9BVS4 552 aaKnown RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 MRPS26Q9BYN8 205 aaKnown RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 TPK1Q9H3S4 243 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 UXTQ9UBK9 157 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 DNAJC12Q9UKB3 198 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PTPRTO14522 1441 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 NPHP4O75161 1426 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ZFYVE9O95405 1425 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 MYO5CQ9NQX4 1742 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 CC2D2AQ9P2K1 1620 aa3.15□□□□□ -1.9
PRPF39-210ENST00000556718 ARPC4-TTLL3A0A0A6YYG9 625 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 TMEM114B3SHH9 223 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 SUPT3HB4E1H0 165 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 SIRPB1O00241 398 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 CDC7O00311 574 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 PHOX2AO14813 284 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 GYG2O15488 501 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 MMP23AO75900 390 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 OR2F2O95006 317 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 PSMG1O95456 288 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 FGGP02679 453 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 MYL2P10916 166 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 LONP1P36776 959 aaKnown RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RGRP47804 291 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 UQCRFS1P47985 274 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 CX3CR1P49238 355 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 BCAP31P51572 246 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 SUB1P53999 127 aaKnown RBP eCLIP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 APOC4P55056 127 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RIPPLY3P57055 190 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 GPX6P59796 221 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ECH1Q13011 328 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 STX3Q13277 289 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 PNOCQ13519 176 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 C1orf94Q6P1W5 598 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF836Q6ZNA1 936 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF620Q6ZNG0 422 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 PIANPQ8IYJ0 282 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 KATNAL2Q8IYT4 538 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 PDIK1LQ8N165 341 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RIBC1Q8N443 379 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF557Q8N988 423 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ANGPTL6Q8NI99 470 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 NELFBQ8WX92 580 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 FGF14Q92915 247 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 C16orf74Q96GX8 76 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 SLC29A1Q99808 456 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ECSITQ9BQ95 431 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 TMEM246Q9BRR3 403 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 UQCC2Q9BRT2 126 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 DNTTIP1Q9H147 329 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RPRD1BQ9NQG5 326 aaKnown RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 CHRAC1Q9NRG0 131 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ARMC1Q9NVT9 282 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 GPATCH2LQ9NWQ4 482 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 CALYQ9NYX4 217 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 STMN3Q9NZ72 180 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 TMEM9Q9P0T7 183 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RSL24D1Q9UHA3 163 aaKnown RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 RWDD2AQ9UIY3 292 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 GNPTGQ9UJJ9 305 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 AP4S1Q9Y587 144 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 NSD3Q9BZ95 1437 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 GAKO14976 1311 aa3.15□□□□□ -1.91
PRPF39-210ENST00000556718 USP42Q9H9J4 1324 aaKnown RBP3.15□□□□□ -1.91
PRPF39-210ENST00000556718 ADGRB2O60241 1585 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TTC37Q6PGP7 1564 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 HECW2Q9P2P5 1572 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 A0A0J9YXY3 114 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SMIM23A6NLE4 172 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ZFP92A6NM28 416 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 C12orf77C9JDV5 145 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms