RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	EMC7	Q9NPA0	242 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	SNTG1	Q9NSN8	517 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	POLR1D	Q9Y2S0	133 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF281	Q9Y2X9	895 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	LRP12	Q9Y561	859 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480	FREM3	P0C091	2139 aa		11.23	□□□□□ -0.61
CACNB3-223	ENST00000552480		A0A075B6Q4	140 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	TMEM212	A6NML5	194 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF724	A8MTY0	619 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	VGLL3	A8MV65	326 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	MKRN2OS	H3BPM6	223 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480		K7ENP7	123 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	AQP7	O14520	342 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	RRP8	O43159	456 aa	Known RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	WNT11	O96014	354 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	INHBB	P09529	407 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	CLEC2L	P0C7M8	214 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	MSR1	P21757	451 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	NTF4	P34130	210 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	SDC2	P34741	201 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OPRL1	P41146	370 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	GUCA1A	P43080	201 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	MTNR1B	P49286	362 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	CCR9	P51686	369 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPS11	P62280	158 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	ROR2	Q01974	943 aa	Known RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	DYNC1I2	Q13409	638 aa	Known RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	SGCA	Q16586	387 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	ACSM3	Q53FZ2	586 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	YIF1B	Q5BJH7	314 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	RIPPLY2	Q5TAB7	128 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR7E24	Q6IFN5	339 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	INO80C	Q6PI98	192 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	UNQ9370/PRO34162	Q6UXP9	181 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	SPATC1	Q76KD6	591 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	TEX19	Q8NA77	164 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR13C5	Q8NGS8	318 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR2G2	Q8NGZ5	317 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR5AK2	Q8NH90	309 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	FNDC9	Q8TBE3	224 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	CPT1C	Q8TCG5	803 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	HSD17B8	Q92506	261 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	PHYHIP	Q92561	330 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	NABP1	Q96AH0	204 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLAMF6	Q96DU3	332 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	C4orf45	Q96LM5	186 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	PDCD1LG2	Q9BQ51	273 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	PRDM14	Q9GZV8	571 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	COMMD4	Q9H0A8	199 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	BCO1	Q9HAY6	547 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	PARPBP	Q9NWS1	579 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	FRRS1L	Q9P0K9	344 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	GDF2	Q9UK05	429 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	CAMK2A	Q9UQM7	478 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	NOSIP	Q9Y314	301 aa	Known RBP	11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF175	Q9Y473	711 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	DMXL1	Q9Y485	3027 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	LHFPL6	Q9Y693	200 aa		11.22	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR6C65	A6NJZ3	312 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR4C45	A6NMZ5	311 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	DVL2	O14641	736 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CASK	O14936	926 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	SRSF10	O75494	262 aa	Known RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZFPL1	O95159	310 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	PDGFA	P04085	211 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	H2BFM	P0C1H6	154 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	MYL9	P24844	172 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	DCTD	P32321	178 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	KIR3DL2	P43630	455 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	MRPS34	P82930	218 aa	Known RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	MXD1	Q05195	221 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	HNRNPA0	Q13151	305 aa	Known RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	STK11	Q15831	433 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	INA	Q16352	499 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZMAT1	Q5H9K5	638 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	WDR38	Q5JTN6	314 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPUSD3	Q6P087	351 aa	Known RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CORO6	Q6QEF8	472 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CATSPERD	Q86XM0	798 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	SIAH3	Q8IW03	269 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	MCEMP1	Q8IX19	187 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	PRSS35	Q8N3Z0	413 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	RGP1	Q92546	391 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	RBM24	Q9BX46	236 aa	Known RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	BARHL1	Q9BZE3	327 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	LINC00470	Q9BZP3	86 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	PLSCR2	Q9NRY7	297 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CRNN	Q9UBG3	495 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480		R4GMQ9	66 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CEP250	Q9BV73	2442 aa		11.21	□□□□□ -0.61
CACNB3-223	ENST00000552480	CNOT1	A5YKK6	2376 aa	Known RBP	11.21	□□□□□ -0.62
CACNB3-223	ENST00000552480	CFAP54	Q96N23	3096 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480		A0A1B0GTH9	108 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	IQCM	A0A1B0GVH7	501 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	SHISA3	A0PJX4	238 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	SLC22A20	A6NK97	555 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF878	C9JN71	531 aa		11.2	□□□□□ -0.62
CACNB3-223	ENST00000552480	MRPL33	O75394	65 aa	Known RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms