RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF208O43345 1280 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 LYZL6O75951 148 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MFN2O95140 757 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 GOSR1O95249 250 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TGDSO95455 350 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 IGHV3-9P01782 118 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 BGLAPP02818 100 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 RAF1P04049 648 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 IL6P05231 212 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TSPAN19P0C672 248 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 HLA-DOBP13765 273 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ATP6V1C1P21283 382 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MT3P25713 68 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TTKP33981 857 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 RYKP34925 604 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 SLC1A3P43003 542 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 IDH2P48735 452 aaKnown RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 CARD18P57730 90 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MTPNP58546 118 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 BSPH1Q075Z2 132 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 GABRA6Q16445 453 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 DUSP7Q16829 419 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 EXOC3L2Q2M3D2 409 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 GPAT3Q53EU6 434 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TSPO2Q5TGU0 170 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 PRAMEF8Q5VWM4 474 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 PRAMEF7Q5VXH5 474 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ATG16L1Q676U5 607 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ADAM5Q6NVV9 412 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 DHRS4L2Q6PKH6 230 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF704Q6ZNC4 412 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF621Q6ZSS3 439 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 EIF3MQ7L2H7 374 aaKnown RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 SLC46A3Q7Z3Q1 461 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM99Q8N816 258 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ATP6V1C2Q8NEY4 427 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 OR52P1PQ8NH57 321 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TAAR8Q969N4 342 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM45BQ96B21 275 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 RNF183Q96D59 192 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 PIK3IP1Q96FE7 263 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 SLC41A3Q96GZ6 507 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ZC3HAV1LQ96H79 300 aaKnown RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ANKRD27Q96NW4 1050 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 OR10A4Q9H209 315 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM38AQ9H6F2 299 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 KAT8Q9H7Z6 458 aaKnown RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 SAR1AQ9NR31 198 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MAN2C1Q9NTJ4 1040 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 FGFR1OP2Q9NVK5 253 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 CCDC167Q9P0B6 97 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MRTO4Q9UKD2 239 aaKnown RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 MAGED1Q9Y5V3 778 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-214ENST00000550893 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
SCAF11-214ENST00000550893 ARHGAP32A7KAX9 2087 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 A0A087WYN8 130 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 A0A1W2PP18 115 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 A0A1W2PR80 420 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CFAP73A6NFT4 308 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 DUXAA6NLW8 204 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 HMGB1P1B2RPK0 211 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 E7EQL1 145 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 SLCO1B7G3V0H7 640 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 UPK3AO75631 287 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 AKR7A3O95154 331 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 IGHV4-39P01824 125 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 OPN1SWP03999 348 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 DBIP07108 87 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 YES1P07947 543 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PNMTP11086 282 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 ETS2P15036 469 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF26P17031 533 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PGCP20142 388 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CCNA2P20248 432 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 MYF6P23409 242 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PCGF2P35227 344 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CHI3L1P36222 383 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 APOBEC1P41238 236 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 MAGEA8P43361 318 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 POLR2HP52434 150 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 RPS3AP61247 264 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 RASGEF1BQ0VAM2 473 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 FADDQ13158 208 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 SQLEQ14534 574 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 RNPS1Q15287 305 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 MS4A18Q3C1V0 323 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 IQCCQ4KMZ1 466 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 AGKQ53H12 422 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 FAM76BQ5HYJ3 339 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PAQR6Q6TCH4 344 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 P4HA3Q7Z4N8 544 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 DHDDSQ86SQ9 333 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CROCCP2Q86T23 111 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 KDM8Q8N371 416 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 ARFGAP2Q8N6H7 521 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 LSMEM1Q8N8F7 131 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 OR9K2Q8NGE7 335 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 OR6T1Q8NGN1 323 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms