RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TNFSF8P32971 234 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 MMP16P51512 607 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 GRB2P62993 217 aaKnown RBP11.94□□□□□ -0.5
PTCH1-215ENST00000547672 FMODQ06828 376 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CARD17Q5XLA6 110 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 ABLIM2Q6H8Q1 611 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 LRFN4Q6PJG9 635 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-215ENST00000547672 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CCDC190Q86UF4 302 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 UBQLNLQ8IYU4 475 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 MFSD4AQ8N468 514 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CPT1CQ8TCG5 803 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 C4orf45Q96LM5 186 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 SH3GL3Q99963 347 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 ULBP2Q9BZM5 246 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 NELFAQ9H3P2 528 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 SP140LQ9H930 580 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CKLFQ9UBR5 152 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 KLHDC2Q9Y2U9 406 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 GRIP1Q9Y3R0 1128 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 TRGV5A0A0B4J1U4 118 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 MEGF11A6BM72 1044 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 OR4C45A6NMZ5 311 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 FAM166BA8MTA8 275 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ZNF814B7Z6K7 855 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ZNF878C9JN71 531 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 MAGEB4O15481 346 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ISG15P05161 165 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 OCM2P0CE71 109 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 UBCP0CG48 685 aaKnown RBP11.93□□□□□ -0.5
PTCH1-215ENST00000547672 CPN1P15169 458 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ZNF708P17019 499 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 TALDO1P37837 337 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 MAGEA5P43359 124 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 STARP49675 285 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 LHX2P50458 406 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 DEFA1P59665 94 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 DEFA3P59666 94 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 PCBD1P61457 104 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ECH1Q13011 328 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 SF3B4Q15427 424 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTCH1-215ENST00000547672 SGCAQ16586 387 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 RGS21Q2M5E4 152 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 DEFB109BQ30KR1 87 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 NRN1LQ496H8 165 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 XKRXQ6PP77 449 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 LRRN1Q6UXK5 716 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 FOXL2NBQ6ZUU3 175 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 MCEMP1Q8IX19 187 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 TMEM123Q8N131 208 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 CCDC54Q8NEL0 328 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ST7LQ8TDW4 575 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 SLAMF6Q96DU3 332 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 UCN2Q96RP3 112 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 PDCD1LG2Q9BQ51 273 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 SRXN1Q9BYN0 137 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 TTTY10Q9BZA0 68 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 ZCCHC4Q9H5U6 513 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 CENPMQ9NSP4 180 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 LRP12Q9Y561 859 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 FLVCR1Q9Y5Y0 555 aa11.93□□□□□ -0.5
PTCH1-215ENST00000547672 TRBV5-5A0A0J9YX44 114 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 TMEM269A0A1B0GVZ9 245 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 FABP12A6NFH5 140 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 ZNF724A8MTY0 619 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 PSMD9O00233 223 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 CTDSP2O14595 271 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 LRRTM2O43300 516 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 MRPL33O75394 65 aaKnown RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 KRT33AO76009 404 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 MPZL1O95297 269 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 FCGR2AP12318 317 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 APEX1P27695 318 aaKnown RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 HSD11B1P28845 292 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 EIF2S3P41091 472 aaKnown RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 CAPZA1P52907 286 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 RPS11P62280 158 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 MRPS34P82930 218 aaKnown RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 IDNKQ5T6J7 187 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 ATP1A1-AS1Q5TC04 95 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 ABHD12BQ7Z5M8 362 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 SYT9Q86SS6 491 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 CATSPERDQ86XM0 798 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 PARP16Q8N5Y8 322 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 FDCSPQ8NFU4 85 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
PTCH1-215ENST00000547672 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 MAP6Q96JE9 813 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 DERL3Q96Q80 235 aa11.92□□□□□ -0.5
PTCH1-215ENST00000547672 SMAD5Q99717 465 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms